Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3386 ATGAATTATGGATCACAATTCACTTTCTCCATCTCCTTGAAAAAAGCACTTCATTTTGCCTCATATTCCGTCCATTTTTCTCACACAAATACCAAATATTTTTATACAATCATATACCAATACCATATGGCAAAAGATCAAAACCAGGGATTGGAATTTGAAAGTGACGAAGCTGAATCTGAGATTGAGGTTCCATTGCCTCTCACAGAAACTTCTCGGGCTTTGTATATGTTAGGAGATATAACTGCAGGGCCATCGTTTAGGTTCACACAATGGCTTCAATTGGTTCGTAAACGCACTTCAAAGTATCGATCCTCTGGCTTCCCTCGTAGTCCTTCAACCAACATGCCTTTTAATTATATAGAATCGATTGAGGATCCAAAATGTGATAAACACCCAGATCAGACAGAAATTAGCTTGTGGGAGAGGCTTGGTAAAGCTGAAATGTTGGATGTTGAATCAAGCTCCATTTCTTGGGATGGGCTCTCTTCCCTGCACCATACTGAGCACGGCAGTAGCAACGAATATTCTGAGGATGAAATGAATAAAGCTCTTGAGGTAACCGTGAATTCTGGAGGTGTTGTCTTCTTTGCCTTTTTCAATTGTCAAGGGAGTGTTGATGCTTCTCCAAAAGAGGCAGCAGCTGTTATAAAAATAGCATCATCAAGAATGGCAACGCAATCTGAACGTCTCGGATATGAATTGGCTAAGTGGCTGGGAATCCAAACTCCGCAGGCTAGAGTCATTCACAATACCAGTTCAGAATGGCAACAAATAAAGGAAGCTACAGAAAAAGCTAGAGAAGCGGCGGCAAATTCTGAGGATGATGAAGCTGGTGAAGTGACGTGTTTTGAACTTTTGGAAGCACTTGAGCTTAGCCGATGTTTGTTTTTAATGAGTTATGTTCATGGTTCGCCTTTGCTTGAAAACACTAGTGCCTTTGAGTCACGGGAATCTGCAGAAAAAACATCAGAAGCTCTTGGCAAGGTATTGATGCTGGACTTGGTCATCCGAAATGAAGATAGGCTCCCTTGCCGTGAGCTTAGGTGGCGCGGGAATTCTGCAAATTTGTTGTTGGCTGAAAAGATGATCTCCGCAAATACAAATACACTACAAGCAGCTTTGGATTCAGCAATTAATCGATATAGACCAAAGGTGATTAAGGCACTTCAAAAAGAAAGAAGGTCAAGTTCAGTAGATTGCAGATTGAATTCCCATAATCCTGGCTTGATATCACAAGCCTCTGATCTTTCAGAGGCCATGGAATCACCAAGATCCACTGACATGAGCCTTAAAAGTCAAACATCGGGAGAATCAATGTCTTCTGACCTTAACCTTGTAGTCATTGATTCTGGTGTTCCTCGGCGACCCCCAGCTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTGGTTGAGTTGCTGATCAATAGTTCTGAGTATGCATCAAACTTGTTACATGATATAACCGGAGGGAAATTAGGATCTCATCTACCAGAAGACATGGATACAAGTGAAATATATGCAAGTGAAGTAACATCAGCAGTTCATGCATTCCGCACTGGTTTCCGAGATGCTCTTAGGGATCTACAGGGATTCCATATATTCCTACTCACCCTTCACCAAAGACTTGATACCTTGTTACGATTATTTATGAATATTATAAGCAAAATATCTTCAGCAGAACCTGACAAAGAGAACTCATTGGTTCCTGACTCGCCTTCACTAGCTGGTGGTGGTATTTTTTCCTCTCCAACAAGTAAGGAGAGGCATGCTAACGATAACAATCAAGATTTTACTGATTCAGAATCACAGAGAACTACTTCAAGGACATTGTCTTCTTGTAATAGAGATTGTGGTGACTCGACTCCTGCGTCAAGAGAAAATTGGCATGGAAAGTTATACAAAGGAAATGGGGAGCCACATCGTAATCTCCGTTTGACTGCTAAGCTCCGTGACTTCAATAAATTTGCGAAGGTTGATGCTGAATCTAATAAAGAATTGGAGCAATGGAATGAAATGCTTAAAAATGACGCCATCAAGCTATGCCAAGAGAACAACTTTAATACCGGATTCTTCGAGGGTAGTGATAATAACAGTGTCGTTGACGCATATGAGCTAAAGGTCAGACTTGAGCATATTCTTGAGAGAATTGCATTGATATCTGATGCTGCAAGTACAGAGAAACCATCTGCTGTTACAAGCTGTCTGTTTATTGGTGGGGCACTGGCTGCAAGATCTGTATACACTCTGCAATACTTAGGAATCACGCATATTTTGTGTTTGTGTACAAATGAAATCGGACAATCTGAAACTCAATTTCCTGATCAATTTGAATACAAAAATTTATCTGTGTTTGACAGTGAAGATTTTAACATCACCACCATATTTGAAGAAGCGTGTGATTTTATAGATTGTGTTGAACAAAAAGGTCAGAAGATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGTGTTACAGTGGTCCTTGCCTACCTAATGCTCAGAAAGAAGTATACTTTATCAAAAGCATGGCAAACACTGAAACGAGTTCACCGTCGAGCACAGCCAAATGATGGTTTTGCAAAAATCTTACAAGTATTGGATCAGAAACTACACGGGAAGGTTTCAATGGAATGGCAGCAGAGAAAACCAACGATGAAAGTTTGTCCCATCTGTGGGAAAAATGCTGGGCTAAGCAGCAGCTCACTTAAGCTACACCTGCAGAAATCGCATAGAAAGCTATCATCTGGTAGTGTAGATAGTGCCATGACAATGGAGATCCAAAAGGCATTAACAGCTTTGAAGATTAGTCGTGGTGGGAGTGTCAGCCCCACACAAAGGTCTTCTCATTCAATAATAGATCCGTAG 2874 0.4078 MNYGSQFTFSISLKKALHFASYSVHFSHTNTKYFYTIIYQYHMAKDQNQGLEFESDEAESEIEVPLPLTETSRALYMLGDITAGPSFRFTQWLQLVRKRTSKYRSSGFPRSPSTNMPFNYIESIEDPKCDKHPDQTEISLWERLGKAEMLDVESSSISWDGLSSLHHTEHGSSNEYSEDEMNKALEVTVNSGGVVFFAFFNCQGSVDASPKEAAAVIKIASSRMATQSERLGYELAKWLGIQTPQARVIHNTSSEWQQIKEATEKAREAAANSEDDEAGEVTCFELLEALELSRCLFLMSYVHGSPLLENTSAFESRESAEKTSEALGKVLMLDLVIRNEDRLPCRELRWRGNSANLLLAEKMISANTNTLQAALDSAINRYRPKVIKALQKERRSSSVDCRLNSHNPGLISQASDLSEAMESPRSTDMSLKSQTSGESMSSDLNLVVIDSGVPRRPPAGKRANDQVNYPKLVELLINSSEYASNLLHDITGGKLGSHLPEDMDTSEIYASEVTSAVHAFRTGFRDALRDLQGFHIFLLTLHQRLDTLLRLFMNIISKISSAEPDKENSLVPDSPSLAGGGIFSSPTSKERHANDNNQDFTDSESQRTTSRTLSSCNRDCGDSTPASRENWHGKLYKGNGEPHRNLRLTAKLRDFNKFAKVDAESNKELEQWNEMLKNDAIKLCQENNFNTGFFEGSDNNSVVDAYELKVRLEHILERIALISDAASTEKPSAVTSCLFIGGALAARSVYTLQYLGITHILCLCTNEIGQSETQFPDQFEYKNLSVFDSEDFNITTIFEEACDFIDCVEQKGQKILVHCFEGKSRSVTVVLAYLMLRKKYTLSKAWQTLKRVHRRAQPNDGFAKILQVLDQKLHGKVSMEWQQRKPTMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSHSIIDP* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3386 957 Pfam Dual specificity phosphatase, catalytic domain 745 867 IPR000340 GO:0008138|GO:0016311
Mtr8g3386 957 Coils Coil 41 61 - -
Mtr8g3386 957 Pfam Actin-fragmin kinase, catalytic 137 452 IPR015275 -
Mtr8g3386 957 ProSiteProfiles Dual specificity protein phosphatase domain profile. 730 875 IPR020422 GO:0006470|GO:0008138
Mtr8g3386 957 CDD DSP 731 867 - -
Mtr8g3386 957 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 799 851 IPR000387 GO:0016311|GO:0016791
Mtr8g3386 957 SMART dsp_5 730 872 IPR020422 GO:0006470|GO:0008138
Mtr8g3386 957 MobiDBLite consensus disorder prediction 599 624 - -
Mtr8g3386 957 MobiDBLite consensus disorder prediction 401 439 - -
Mtr8g3386 957 Gene3D Protein tyrosine phosphatase superfamily 713 885 IPR029021 -
Mtr8g3386 957 SUPERFAMILY Protein kinase-like (PK-like) 91 466 IPR011009 -
Mtr8g3386 957 Gene3D - 306 435 IPR036940 GO:0016301
Mtr8g3386 957 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 730 875 IPR029021 -
Mtr8g3386 957 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 41 957 - -
Mtr8g3386 957 MobiDBLite consensus disorder prediction 563 639 - -
Mtr8g3386 957 Gene3D - 179 301 - -
Mtr8g3386 957 MobiDBLite consensus disorder prediction 397 439 - -
Mtr8g3386 957 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 41 957 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3386 Mtr-Chr8 44382927 44390459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3386 45 941 Protein tyrosine phosphatase (PTP) family AT5G23720 64.388 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3386 K14165 - gmx:100791993 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3386 8 44382927 44390459 Mtr8g3386 8 44382927 44390459 ECH