Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3384 ATGTTTGGGATGAGAGATCTGGAAGAAGAAAGAAACATGGCATCATCAGAAGTATCTATGAAGGGAAATTCTGTCAACGGAAAAGGTGAAAACAACGTTGATGGTGTTGGAGATGCTCAAAATGGTTCTTCATCGTCATCAACAGGAAGAGAAGCTGAAGCTGCACTTTACAGAGAACTATGGCATGCGTGTGCTGGTCCTTTGGTAACAGTTCCAAGAGAAGGAGAACTTGTGTTCTATTTTCCACAAGGACATATTGAACAGGTGGAAGCTTCAACAAATCAAGCATCGGAACAACACATGCCGGTTTACGATCTCCGACCTAAGATCCTTTGTCGGGTCATCAACGTTATGCTAAAGGCGGAGCCAGATACTGATGAGGTGTTTGCACAAGTGACTTTGGTACCAGAGCCCAATCAAGATGAAAATGCTGTTGAGAAAGAAGCTCCACCTGCTCCTCCGCCGAGATTTCATGTTCATTCGTTTTGTAAAACGTTGACCGCATCTGATACCAGTACTCATGGTGGTTTTTCTGTACTTAGACGACATGCTGATGAATGTCTTCCTCCTCTGGATATGTCAAAGCAACCACCTACACAGGAATTGGTGGCCAAGGATCTGCATGGGAATGAGTGGCGTTTTAGGCATATTTTTCGCGGTCAACCGCGTAGACATTTGCTGCAGAGTGGTTGGAGTGTTTTTGTCAGTTCTAAGAGGCTGGTTGCTGGGGATGCATTTATATTTCTGAGAGGTGAGAATGGGGAGCTTCGAGTTGGTGTCAGGCGTGCAATGAGACAGCAGGGTAATGTTCCATCCTCGGTTATCTCTAGCCATAGCATGCATCTTGGTGTTCTTGCAACTGCCTGGCATGCTGTTTTGACTGGGACCATGTTCACTGTTTATTACAAACCCCGGACTAGTCCAGCGGAGTTTATTGTTCCGTATGATCAATACATGGAGTCTCTAAAAAATAATTATACAATAGGCATGCGGTTCAAAATGAGGTTTGAGGGTGAAGAGGCTCCTGAGCAAAGGTTTACGGGTACCATTGTTGGAATTGAAGATTCCGACTCCAAAAGATGGCCAACATCTAAATGGAGATGTCTCAAGGTTAGATGGGATGAAACATCTAACATACCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATAGAGCCTGCTCTTGCTCCTCCAGCTCTAAATCCTCTTCCAATGCCCAGGCCTAAAAGGCCCCGTGCTAACGTGGTGCCGTCATCCCCAGATTCTTCTGTTCTTACCCGCGAAGCATCGTCAAAAGTAAGCATGGACCCTTTGCCCACTAGTGGTTTCCAGAGGGTCTTGCAAGGTCAAGAATCATCGACCTTGAGAGGAAATTTGGCTGAAAGCAACGACTCTTACACTGCAGAGAAGTCTGTTGCGTGGACTCCTGCAACTGATGAAGAAAAGATGGATGCTGTTTCTACTTCAAGAAGGTATGGTTCAGAGAACTGGATGCCAATGTCAAGGCAGGAACCAACGTATTCGGACCTTCTGTCGGGATTTGGTAGTACCCGTGAAGGCAAACATAACATGCTTACTCAATGGCCTGTAATGCCACCTGGTCTGTCGCTAAATTTCTTGCACTCCAATATGAAAGGTTCTGCACAAGGCAGTGATAATGCAACTTACCAAGCTCAAGGGAATATGAGATACAGTGCATTTGGTGATTACTCAGTGCTTCATGGACATAAAGTTGAAAATCCACACGGAAACTTTTTGATGCCACCACCACCACCAACACAATACGAGAGTCCCCATTCCAGAGAATTGTCACAGAAACAAATGTCTGCAAAAATAAGTGAGGCTGCAAAACCAAAAGACAGTGACTGTAAGCTATTCGGCTTCTCGCTTCTCAGTAGCCCAACTATGCTGGAGCCTTCATTATCTCAAAGAAATGCTACAAGTGAGACTTCTAGTCACATGCAAATTTCATCACAACATCACACATTTGAAAATGATCAGAAGTCCGAACATTCAAAGAGCTCCAAACCAGCAGATAAACTAGTCATAGTTGATGAGCATGAGAAGCAGTTGCAAACTTCTCAGCCTCATGTTAAAGATGTTCAACTCAAACCTCAAAGTGGTTCTGCTAGAAGCTGCACGAAAGTTCACAAGAAAGGGATTGCGCTTGGTAGGTCAGTTGATCTTACAAAGTTTAGTGACTATGACGAATTAACTGCTGAATTGGATCAGCTATTTGAATTTAGAGGTGAACTAATATCTCCACAAAAGGATTGGCTTGTTGTCTTCACTGATAATGAGGGTGACATGATGCTTGTTGGCGACGATCCATGGCAGGAGTTTTGTTCAATGGTTCGCAAAATATATATCTACCCCAAAGAAGAGATTCAGAAAATGAGCCCGGGTACACTGAGTTCAAAAAATGAAGAGAATCATTCAGCTACCGATGGTGGAGATGCACAAGAAACTAAATCTCAGCTGAATCAATCAGCTTCAGATAATTGA 2502 0.44 MFGMRDLEEERNMASSEVSMKGNSVNGKGENNVDGVGDAQNGSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASSKVSMDPLPTSGFQRVLQGQESSTLRGNLAESNDSYTAEKSVAWTPATDEEKMDAVSTSRRYGSENWMPMSRQEPTYSDLLSGFGSTREGKHNMLTQWPVMPPGLSLNFLHSNMKGSAQGSDNATYQAQGNMRYSAFGDYSVLHGHKVENPHGNFLMPPPPPTQYESPHSRELSQKQMSAKISEAAKPKDSDCKLFGFSLLSSPTMLEPSLSQRNATSETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGTLSSKNEENHSATDGGDAQETKSQLNQSASDN* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3384 833 MobiDBLite consensus disorder prediction 596 610 - -
Mtr8g3384 833 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 39 817 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mtr8g3384 833 MobiDBLite consensus disorder prediction 16 50 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 688 709 - -
Mtr8g3384 833 Pfam AUX/IAA family 755 798 IPR033389 -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 694 709 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 662 676 - -
Mtr8g3384 833 Pfam Auxin response factor 288 370 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mtr8g3384 833 ProSiteProfiles B3 DNA-binding domain profile. 162 264 IPR003340 GO:0003677
Mtr8g3384 833 SUPERFAMILY DNA-binding pseudobarrel domain 158 291 IPR015300 -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 638 676 - -
Mtr8g3384 833 Gene3D - 325 395 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 638 661 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 1 15 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 415 466 - -
Mtr8g3384 833 PANTHER AUXIN RESPONSE FACTOR 2 39 817 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 1 50 - -
Mtr8g3384 833 Gene3D - 159 264 IPR015300 -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 799 833 - -
Mtr8g3384 833 Pfam B3 DNA binding domain 162 263 IPR003340 GO:0003677
Mtr8g3384 833 MobiDBLite consensus disorder prediction 580 615 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 817 833 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 394 412 - -
Mtr8g3384 833 MobiDBLite consensus disorder prediction 394 466 - -
Mtr8g3384 833 ProSiteProfiles PB1 domain profile. 710 792 IPR000270 GO:0005515
Mtr8g3384 833 SMART B3_2 162 264 IPR003340 GO:0003677
Mtr8g3384 833 CDD B3_DNA 160 262 IPR003340 GO:0003677
Mtr8g3384 833 SUPERFAMILY CAD & PB1 domains 713 787 - -
Mtr8g3384 833 Gene3D - 706 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3384 Mtr-Chr8 44361400 44366291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3384 13 831 B3 DNA Binding Superfamily AT5G62000 63.876 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mtr8g3384 B3 1.6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3384 - - gmx:100780892 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3384 8 44361400 44366291 Mtr8g3384 8 44361400 44366291 ECH