Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3362 ATGTGGATGGTGGGTTACAGTGAAGGTGGTGAGTTCAACATGGCTGATTATCCATTATGTGGAAGGAAACTAAGGCCTCTCATGTCAAGACCAGTCCCAATCCCAGTCCCTACTACTTCTCCTAACAACACTTCAACTATAACTCCTTCCTTAAACCGCATTCATGGTGGCAATGATTTATTTTCACAATATCATCACAATCTGCAGCAGCAAGCATCAGTAGGAGATCATAGCAAGAGATCAGAGTTGAATAATAATAATAATCCATCTGCAGCAGTGGAAGAATTGTATAGAAGAGGAACAAGAACACCTTCTGCTGAGCAAATCCAACAAATCACTGCCCAGCTTAGAAAAATTGGAAAAATTGAAGGCAAAAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGGCAAAAACGACGCCGTCAAATGTTCTTAGTGAAAATGGGCTTTTGGAGAGTGTTGTTTTCGGTTGGTTTTGGAGAGAAATGA 498 0.4016 MWMVGYSEGGEFNMADYPLCGRKLRPLMSRPVPIPVPTTSPNNTSTITPSLNRIHGGNDLFSQYHHNLQQQASVGDHSKRSELNNNNNPSAAVEELYRRGTRTPSAEQIQQITAQLRKIGKIEGKNVFYWFQNHKARERQKRRRQMFLVKMGFWRVLFSVGFGEK* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3362 165 Gene3D - 88 146 - -
Mtr8g3362 165 MobiDBLite consensus disorder prediction 71 90 - -
Mtr8g3362 165 Pfam Homeodomain 92 140 IPR001356 GO:0003677
Mtr8g3362 165 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 42 146 - -
Mtr8g3362 165 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 42 146 IPR044555 GO:0003700|GO:0099402
Mtr8g3362 165 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
Mtr8g3362 165 SUPERFAMILY Homeodomain-like 79 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3362 Mtr-Chr8 44135040 44135883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3362 1 146 Wox Gene Family AT3G18010 44.785 1.21e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr8g3362 Homeodomain 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3362 - - mtr:MTR_8g095580 312.383