Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3344 ATGGCATCTGCAATAGTTCGTAGGAACATCATCAGAAGCAACAACTTGAAAAGGTTGTCTTGTTGGCGTTTGAATAATAACAAACAGTTGTTGAATAATGTTGAAGACGCATGTACCATTTACACAGAAGCTGTTGGTGGTGTTGGATTACCATCTTACATGCGTGGTGCTGTTTTTCGGGAACCCAACAAACCTCTCACCATTGAAGAATTTCACATTCCTCGTCCCAAAGCTGGTGAACTTCTCATCAAAACCAAGGGATGTGGAGTATGCCACTCTGATCTTCATGTCATGAAAGGTGAAATTCCGTTTTCAAGTCCTTGTGTTGTGGGCCATGAGATTACTGGTGAAGTTGTTGAACATGGACAACACACTGATTCCAAAACTATAGAAAGGCTTCCAATTGGATCTCGAGTTGTTGGAGCCTTCATTATGCCTTGTGGCAACTGTTCCTACTGTTCAAAGGGCCATGATGATCTGTGTGAAGCTTTTTTTGCTTATAACCGCGCAAAAGGAACCCTATACGATGGTGAAACTCGGCTATTTCTTCGAGGCAGTGGAAACCCGATATACATGTATAGTATGGGAGGGCTTGCTGAATACTGTGTTGTGCCGGCAAATGCATTGGCGGTATTGCCAAATTCAATGCCATATACCGAGTCTGCAATACTAGGATGTGCTGTTTTTACTGCTTATGGTGCAATGGCTCATGCAGCCGAAGTGCGCCCTGGTGATACTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTCTGCAGATAGCTAGAGCATTTGGTGCCTCGGATATAATTGCTGTTGATGTTCAGGATGAAAAGCTAGAGAAAGCAAAGACACTTGGTGCAACTCACACAATAAATTCGGCTAAGGAAGATCCCATTGAAAAGATACTTGAAATTACTGGTGGAAAGGGTGTTGACGTTGCTGTTGAAGCCTTAGGGAGACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAAGATGGAGGAAAAGCAGTGATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAGGTGGATATAAATAGACTTGTTCGCAGAAAGATAAAAGTTATTGGCTCATATGGAGGGAGGGCTAGGCAAGATCTTCCAAAGTTAATTAGATTGGCAGAAACAGGTATCTTCGACCTTGGCCATGCTGTTACAAGAAAATACACTTTTGAGGAGTCAGGCAAAGCATTCCAGGATCTCAACGAAGGAAAAATAGTCGGTCGGGCTGTAATCGAGATAGTATAG 1278 0.4335 MASAIVRRNIIRSNNLKRLSCWRLNNNKQLLNNVEDACTIYTEAVGGVGLPSYMRGAVFREPNKPLTIEEFHIPRPKAGELLIKTKGCGVCHSDLHVMKGEIPFSSPCVVGHEITGEVVEHGQHTDSKTIERLPIGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRGSGNPIYMYSMGGLAEYCVVPANALAVLPNSMPYTESAILGCAVFTAYGAMAHAAEVRPGDTVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLEKAKTLGATHTINSAKEDPIEKILEITGGKGVDVAVEALGRPQTFAQCTQSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIKVIGSYGGRARQDLPKLIRLAETGIFDLGHAVTRKYTFEESGKAFQDLNEGKIVGRAVIEIV* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3344 425 CDD Zn_ADH10 54 423 - -
Mtr8g3344 425 SUPERFAMILY GroES-like 49 257 IPR011032 -
Mtr8g3344 425 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 54 424 - -
Mtr8g3344 425 Gene3D - 231 368 - -
Mtr8g3344 425 SMART PKS_ER_names_mod 61 422 IPR020843 GO:0016491
Mtr8g3344 425 Gene3D - 58 414 - -
Mtr8g3344 425 Pfam Alcohol dehydrogenase GroES-like domain 79 209 IPR013154 -
Mtr8g3344 425 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 216 389 IPR036291 -
Mtr8g3344 425 Pfam Zinc-binding dehydrogenase 254 385 IPR013149 -
Mtr8g3344 425 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 54 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3344 Mtr-Chr8 43957752 43960903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3344 68 346 Monolignol Biosynthesis Gene Families AT4G37970 27.113 1.58e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3344 - - gmx:100802431 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3344 8 43957752 43960903 Mtr8g3344 8 43957752 43960903 ECH