Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3333 ATGGCTGCTCCACCGGTAAACACATTACCGGTAGCATACCAAGCATGGACAAGTCTAGCAGTACCAGACTGGTTAAACAAAGGAGACAACTCATGGCAAATGATATCAGCTACCCTTGTTGGAATTCAAAGCATGCCAGGACTAGTTATCCTCTATGGCAGCATAGTGAAAAAGAAATGGGCTGTAAACTCTGCTTTCATGGCTCTCTACGCTTTCGCGGCGGTTATAATCTGTTGGGTTACATGGGCTTATAAGATGTCATTTGGTGAAAAACTTTTACCCTTTTGGGGTAAAGCTGGCCCTGCTTTAGGCCAGAAATTTCTAATCAGACAGGCAGGGCTACCCGCGACGGTGCATTATCATCATGACGGTAGTTTGGAGACTGCTGAGATTGAACCATTTTATCCAATGGCTACTATGGTTTGGTTTCAGTGTGTTTTTGCTGCTATTTCACTTGTTATATTGGCTGGTTCTGTTTTGGCTAGGATGAATTTTAAGGCTTGGATGATGTTTGTGCCACTTTGGTTAACTTTTTCTTATACTATTGGTGCTTTTAGTTTGTGGGGTGGTGGTTTCTTGTTTCAATGGGGTGTTATGGATTATTCTGGTGGTTATGTTATTCATCTTTCTTCTGGGATTGCTGGTTTCACCGCTGCTTATTGGGTGGGGCCTAGATCGAAGAAGGACAGGGAGAGATTCCCACCAAACAATGTGTTACTAACGTTGGCAGGGGCAGGGTTACTATGGATGGGATGGGCAGGTTTCAACGGTGGAGATCCCTACTCTGCCAACATTGATTCATCAATGGCTGTTCTCAACACAAACATTTGTGCTGCTACAAGCCTCCTTGTATGGACATGGCTTGATGTCATATTCTTCAAAAAACCATCAGTTATTGGAGCTGTTCAAGGCATGATTACTGGTCTTGTTTGCATTACTCCCGGAGCTGGTTTGGTTCAAGGATGGGCTGCCATAGTAATGGGAGTGCTATCAGGAAGTGTGCCATGGTACACAATGATGGTACTTGGAAAGAAGATATCAATATTTCAAAAGGTTGATGACACCCTCGCCGTGTTCCACACTCATGCCGTGGCTGGCCTACTAGGCGGTGTACTCACCGGCCTATTCGCCGAGCCACAATTAAGTACTCTCTTTCTCCCCGTCACCAATTCCAAAGGAGGTGTCTATGGAGGCTCTGGTGGTGTCCAAATTTTAAAACAAATAGTTGGAGCTTTATTCATCGTTGGATGGAACATTGTTGCTACTTCAATAATTTGTCTAGTTATAAGTTTCATTGTTCCTTTAAGAATGACGGAGGAAGAGTTGCTCATTGGGGATGATGCAGTTCATGGGGAAGAAGCTTATGCTTTATGGGGTGATGGAGAGAAACTTAGTCTCTACAAAGATGATACTACACAACATGGCATGGCTTCAAGTGGTGTCACTCAAGTTGTCTAG 1458 0.4403 MAAPPVNTLPVAYQAWTSLAVPDWLNKGDNSWQMISATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVTWAYKMSFGEKLLPFWGKAGPALGQKFLIRQAGLPATVHYHHDGSLETAEIEPFYPMATMVWFQCVFAAISLVILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWGGGFLFQWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWMGWAGFNGGDPYSANIDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGVLSGSVPWYTMMVLGKKISIFQKVDDTLAVFHTHAVAGLLGGVLTGLFAEPQLSTLFLPVTNSKGGVYGGSGGVQILKQIVGALFIVGWNIVATSIICLVISFIVPLRMTEEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTQHGMASSGVTQVV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3333 485 PANTHER AMMONIUM TRANSPORTER MEP2 17 478 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr8g3333 485 PANTHER AMMONIUM TRANSPORTER 17 478 - -
Mtr8g3333 485 ProSitePatterns Ammonium transporters signature. 200 225 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mtr8g3333 485 Pfam Ammonium Transporter Family 32 455 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mtr8g3333 485 SUPERFAMILY Ammonium transporter 24 437 - -
Mtr8g3333 485 TIGRFAM amt: ammonium transporter 29 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr8g3333 485 Gene3D Ammonium transporter AmtB like domains 8 458 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3333 Mtr-Chr8 43854822 43857642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3333 137 474 Inorganic Solute Cotransporters AT2G38290 71.302 1.03e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3333 K03320 - gmx:100785993 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3333 8 43854822 43857642 Mtr8g3333 8 43854822 43857642 ECH