Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3332 ATGTTGCCCCCAAATTCTAGCAGGGCTCCTTTCAAAATATTGATGAGGTGGTTCATATTCCTTGTTGTCTTGAAACTCAGTTCTGCAATCAAAGATCCTGATATAGAAGGTGAAGCTCTGCTTGATCTTTTGAATTACCTCAATGATTCAAATAATCAAATACAAGATTGGGATAGTCATTTAGTGAGCCCATGTTTCAGCTGGTCACATGTCACTTGTAGAAATGGACATGTCATATCTCTGACCCTGGCTTCTATTGGATTTTCTGGAACACTTTCTCCCTCAATTACCAGATTGAAATATTTGGTTAACTTGGAATTGCAGAACAACAATCTTTCAGGCCCCATACCTGATTACATTTCCAACTTGACAGACCTACAATATCTGAATCTTGCTAACAATAATTTTAATGGCTCTATACCGGTTAGTTGGGGTCAACTATCCAGTCTCAAGAATGTGGATCTTTCATCTAATGGTCTTACCGGAACTATCCCTACACAACTCTTTTCAGTTCCAATGTTTAACTTTTCAGATACGCCTCTTGATTGTGGCTCTAGCTTCGACCAGCCTTGTGTTTCTAAATCTGATCATCCAGCTTCAACCAACAAATCAAAATTGGCAAAAGCCATGCCTTATGCGAGTTGCGGTGCATTTGTGCTTCTGTGTCTTGGAGCCATCTTTACATATAGACACCATCAAAAGATCAGACACAAAAGTGACGTCTTTGTTGATGTTTTAGGTGAAGATGAGAGCAAAATTTCTTTTGGACAATTAAGAAGGTTTTCTTTGCGAGAACTCCAACTCGCAACTAAAAGTTTCAGCGAAAGCAATGTAATTGGCCAAGGTGGATTTGGAAAAGTCTACAAAGGAGTACTCTCAGATAACACAAAAATCGCTGTGAAACGCCTCACCGATTATCATAATCCTGGTGGTGAGGCTGCGTTTGAGAGAGAAGTTGATCTGATTAGCGTTGCAGTTCATAGAAATCTCCTAAGACTAATTGGATTCTGTACAACATCAACTGAAAGAATCCTTGTATATCCTTTCATGGAAAATCTAAGTGTAGCATATCAACTAAGAGATTTGAAATCTGATGAGAAAGGCTTGGATTGGCCGACAAGGAAGCGTGTAGCTTTTGGTACGGCGCACGGTCTAGAATATCTACACGAGCAATGCAATCCGAAGATAATTCACCGTGATCTAAAGGCTGCAAATATCCTTCTAGATGATGAGTTTGAACCTGTTCTAGGTGATTTTGGACTGGCCAAGCTGGTTGATGCAAGGATGACTCATGTTACCACTCAAGTGCGCGGTACAATGGGTCATATTGCCCCGGAATATTTGTCAACTGGAAAATCATCAGAAAAGACAGATGTTTTTGGATATGGCATAACACTTCTTGAACTAATCACTGGTCAGCGCGCAATTGACCTCTCTCGGCTCGAAGAGGAGGAGGACGTTCTTTTGATTGATCATGTAAAAAATCTAATTAGAGAAAATAGGCTAGAGGACATAGTGGATAACAATTTGGAGACTTATGATCCAAAAGAAGCTGAAACCATTCTTCAAGTTGCATTACTTTGCACACAAGGCTATCCAGAGGATCGTCCGACAATGTCCGAGGTGGTAAAAATGTTGCAGGGAGTAGGGTTGGCAGATAGATGGGCTGACTGGAAGCAACTTGAAGAGGCTAGAAATCAAGAAATAGAATTATCACTCATGACTCACCAATTTCCTTGGAGTGATGAATCTACTCTTGATCAAGAAGCTATACAACTTTCCAGAGCAAGATAG 1794 0.4036 MLPPNSSRAPFKILMRWFIFLVVLKLSSAIKDPDIEGEALLDLLNYLNDSNNQIQDWDSHLVSPCFSWSHVTCRNGHVISLTLASIGFSGTLSPSITRLKYLVNLELQNNNLSGPIPDYISNLTDLQYLNLANNNFNGSIPVSWGQLSSLKNVDLSSNGLTGTIPTQLFSVPMFNFSDTPLDCGSSFDQPCVSKSDHPASTNKSKLAKAMPYASCGAFVLLCLGAIFTYRHHQKIRHKSDVFVDVLGEDESKISFGQLRRFSLRELQLATKSFSESNVIGQGGFGKVYKGVLSDNTKIAVKRLTDYHNPGGEAAFEREVDLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYQLRDLKSDEKGLDWPTRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEPVLGDFGLAKLVDARMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELITGQRAIDLSRLEEEEDVLLIDHVKNLIRENRLEDIVDNNLETYDPKEAETILQVALLCTQGYPEDRPTMSEVVKMLQGVGLADRWADWKQLEEARNQEIELSLMTHQFPWSDESTLDQEAIQLSRAR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3332 597 PANTHER LRR RECEPTOR-LIKE KINASE 13 597 - -
Mtr8g3332 597 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Mtr8g3332 597 ProSiteProfiles Protein kinase domain profile. 273 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3332 597 Gene3D Transferase(Phosphotransferase) domain 1 350 565 - -
Mtr8g3332 597 SUPERFAMILY L domain-like 37 172 - -
Mtr8g3332 597 Gene3D Ribonuclease Inhibitor 33 203 IPR032675 -
Mtr8g3332 597 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 597 - -
Mtr8g3332 597 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Mtr8g3332 597 Gene3D Phosphorylase Kinase; domain 1 242 349 - -
Mtr8g3332 597 SMART serkin_6 273 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3332 597 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Mtr8g3332 597 Pfam Protein kinase domain 274 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3332 597 Coils Coil 586 597 - -
Mtr8g3332 597 SUPERFAMILY Protein kinase-like (PK-like) 252 547 IPR011009 -
Mtr8g3332 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3332 Mtr-Chr8 43844602 43848900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3332 21 592 Receptor kinase-like Gene Family AT5G65240 56.427 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mtr8g3332 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3332 - - gmx:100800886 1027.7