Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3331 ATGGTGAGATCTGGTTTTCTTTTGATTGTATCAATGTTGATTCTTAGCACTTCATTATCGTCTTCATACATGTTTAATGTTGGTGGCCGCAATGGTTGGGGTGTAAGACGTTCACCTGAACACTACAATGCATGGTCTAGCAGAACTAGGTTTCAAATCAACGACACACTTCGTTTCAAGTATAACAAAGGATCTGATTCTGTGTTGGTGGTAAACAACCAAAACTATGATTCATGCGACACAAAGAATCTGATCTACAAGATGGACGATGGAGAGTCAACTTTTTCATTGAATAAAACAGGTCCCTTTTACTTCATTAGTGGAGTGAATTGCCAAAATGGTGAAAAGTTTAAGGTCGTCGTTATCTCTCCACACCACAACCATGAACATCAAGGTCCATCATCATCTCCGATGGTTGCACCGGTATACTCCCCAGCACCGTCTCCCTCATGGAACTCTCCAACTTACTCCCCAGCACAACCACCGGCTTGGAATGCTCCTTCACCAAGTTTTGCTGGTTGGACGGCTCCAGCGCAGTCTCCGTCATGGAATGCTCCTTCACCTTCTGAAACTGCACCGGTACGCTCCCCATCACAATCACCGACCTGGAATGCTCCTTCACCTTCTGAGGCTGCACCGGTACACTCCCCAACAAATTCTCCTCCAGTGAATGCTCCTTCACCTTCTGAGGTCGCACCGGTACAATTCGCAAAAAATTCTCCGGTGGTGAATGCTCCGGAACCAAGTGCTACCAAAGAGAATGCTCCTTCACCAAGTGCTACCGAAAAGACTGATTCACCACCAAGTGCTCAAAGCGAAACTCCTCCACCTTCTACCAATAATGATTCTCCTGCACCACCTCCTAATCAGTCGGATTCTACGAGGTTGAGTGGTTATGTCAATGGGGGTCTTGTGGTGGCTTTGGTCTTGGGTAGTTTTACTTTTTAG 948 0.462 MVRSGFLLIVSMLILSTSLSSSYMFNVGGRNGWGVRRSPEHYNAWSSRTRFQINDTLRFKYNKGSDSVLVVNNQNYDSCDTKNLIYKMDDGESTFSLNKTGPFYFISGVNCQNGEKFKVVVISPHHNHEHQGPSSSPMVAPVYSPAPSPSWNSPTYSPAQPPAWNAPSPSFAGWTAPAQSPSWNAPSPSETAPVRSPSQSPTWNAPSPSEAAPVHSPTNSPPVNAPSPSEVAPVQFAKNSPVVNAPEPSATKENAPSPSATEKTDSPPSAQSETPPPSTNNDSPAPPPNQSDSTRLSGYVNGGLVVALVLGSFTF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3331 315 PANTHER EARLY NODULIN-LIKE PROTEIN 2 144 - -
Mtr8g3331 315 CDD OsENODL1_like 23 122 IPR041846 -
Mtr8g3331 315 MobiDBLite consensus disorder prediction 270 284 - -
Mtr8g3331 315 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Mtr8g3331 315 MobiDBLite consensus disorder prediction 172 218 - -
Mtr8g3331 315 PANTHER BLUE COPPER PROTEIN 2 144 IPR039391 GO:0009055
Mtr8g3331 315 MobiDBLite consensus disorder prediction 126 297 - -
Mtr8g3331 315 Pfam Plastocyanin-like domain 33 114 IPR003245 GO:0009055
Mtr8g3331 315 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
Mtr8g3331 315 PRINTS Proline rich extensin signature 133 149 - -
Mtr8g3331 315 PRINTS Proline rich extensin signature 165 186 - -
Mtr8g3331 315 PRINTS Proline rich extensin signature 186 202 - -
Mtr8g3331 315 PRINTS Proline rich extensin signature 209 226 - -
Mtr8g3331 315 PRINTS Proline rich extensin signature 228 253 - -
Mtr8g3331 315 MobiDBLite consensus disorder prediction 140 165 - -
Mtr8g3331 315 Gene3D - 23 134 IPR008972 -
Mtr8g3331 315 MobiDBLite consensus disorder prediction 242 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3331 Mtr-Chr8 43840866 43842386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3331 6 179 Phytocyanin Superfamily AT4G28365 42.222 1.78e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3331 - - mtr:MTR_8g095020 602.053