Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3330 ATGATTGAATTGAAATGTGTGAAAAAGGTTAGGGGTGGTAATGGTTATTATAGTGAGCAATTAACAATGATGAGATATGGTTTTGTTTTGATTGTATCAATGCTAGTTCTCAGCACTTCATTGTCATCTGCATACAAGTTTAATGTCGGTGGCAACCATGGTTGGGCAGTCAAAAGCTCACGACACTACTACAATAATTGGGCGACCAGGACTAGGTTTCGAATCAACGACATACTTTTTTTCAAGTACAACAAAGGATCCGATTCAGTATTGGTGGTAAACAAACACGATTATGATTCATGCAACATCAAAAATCCAATCCACAAGATGCATGATGGAGATTCAATTTATAAGTTTGACAAAGTAGGTCTCTTTCACTTCATCAGTGGAAACCTTGTGAATTGCCAAAATGGTCAAAAGTTGAAGGTCGCTGTTTACTCTCCACGCCACCACCACCACCACAGTCCATCATTATCTCCAACGGTTGCACCGGTGCACTCCCCATCATTGTCTCCCTCATGGAATTCTCCTGCACGCTCCCCAACACAACCATCGGCTCGAAATGCTCCCTCACCAAGTGCTGCTCCGACACGCTCCCCAACACAATCACCAGCTTGGAATTCTCCCTCACCAAGTGCTGCTCCGGCACGCTCCCCAACACAACCACCGGCTTGGAATGCTCCCTCATCAAGTGTTGCTCCATCACGCTCCCCAACACAACCACCAGCTTGGAATGCTCCCTCATCAAGTGTTGCTCCAACACGCTCCCCAACACAACCACCAGCTTGGAATGCTCCCTCACCAAGTGCTATTGTCTGGACTGCTCCGGCACACTCCCCAGTACAATCGCCAGCTTGGAATGCTCCCTCGTCAAGTGCTGCTCCAACACAATCGCCTCGAAATGCTCCTTCACCCAATAATGAATCTATTTCCAATGAGGATGATGATGATGATGATTCGTTTTAA 966 0.4627 MIELKCVKKVRGGNGYYSEQLTMMRYGFVLIVSMLVLSTSLSSAYKFNVGGNHGWAVKSSRHYYNNWATRTRFRINDILFFKYNKGSDSVLVVNKHDYDSCNIKNPIHKMHDGDSIYKFDKVGLFHFISGNLVNCQNGQKLKVAVYSPRHHHHHSPSLSPTVAPVHSPSLSPSWNSPARSPTQPSARNAPSPSAAPTRSPTQSPAWNSPSPSAAPARSPTQPPAWNAPSSSVAPSRSPTQPPAWNAPSSSVAPTRSPTQPPAWNAPSPSAIVWTAPAHSPVQSPAWNAPSSSAAPTQSPRNAPSPNNESISNEDDDDDDSF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3330 321 CDD OsENODL1_like 45 145 IPR041846 -
Mtr8g3330 321 MobiDBLite consensus disorder prediction 160 214 - -
Mtr8g3330 321 Gene3D - 45 157 IPR008972 -
Mtr8g3330 321 MobiDBLite consensus disorder prediction 147 321 - -
Mtr8g3330 321 Pfam Plastocyanin-like domain 55 139 IPR003245 GO:0009055
Mtr8g3330 321 ProSiteProfiles Phytocyanin domain profile. 45 147 IPR003245 GO:0009055
Mtr8g3330 321 PANTHER EARLY NODULIN-LIKE PROTEIN 23 160 - -
Mtr8g3330 321 PANTHER BLUE COPPER PROTEIN 23 160 IPR039391 GO:0009055
Mtr8g3330 321 SUPERFAMILY Cupredoxins 44 146 IPR008972 -
Mtr8g3330 321 MobiDBLite consensus disorder prediction 280 309 - -
Mtr8g3330 321 MobiDBLite consensus disorder prediction 223 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3330 Mtr-Chr8 43822332 43835573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3330 18 230 Phytocyanin Superfamily AT5G53870 40.376 5.07e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3330 - - mtr:MTR_8g094990 410.994