Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3329 ATGAAGGTGAAGAAGGGATGGCTAGCAGTTCAAGTAGGTTCAGAGGAAGAACACTCTCAAGTAGATGGTGTCACTGTCAGTGATTCTCAAAGATTTCTCATCCCTATTTCATATCTTTATCATCCTCTTTTCAACCATCTTCTTGATAAAGCTTACGAGATTTATGGCTACAATACTGATGGTCCTCTCAAGCTTCCTTGTTCTGTTGATGACTTTCTTCACCTCCGTTGGCGAATTGAAAAAGAATCCACACCCTATCATCACCATCACCAACATCATCATCACCATTTGATTCCTCATGCTTTGTATTTCAATTCTTGTTGA 324 0.3951 MKVKKGWLAVQVGSEEEHSQVDGVTVSDSQRFLIPISYLYHPLFNHLLDKAYEIYGYNTDGPLKLPCSVDDFLHLRWRIEKESTPYHHHHQHHHHHLIPHALYFNSC* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3329 107 PANTHER SMALL AUXIN-UP RNA-RELATED 1 96 - -
Mtr8g3329 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 96 IPR003676 GO:0009733
Mtr8g3329 107 Pfam Auxin responsive protein 24 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3329 Mtr-Chr8 43812554 43813111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3329 3 106 Calmodulin-binding Proteins AT5G20810 36.449 2.68e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3329 - K14488 gmx:100306557 152.525