Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3327 ATGGGAATGTTGAGTAAAGAAGAGAAGGAAAAAGCAGCAGTAGGGATGGCAGCGACAATGGTGGCGACAGTGAGAGGAAGTAAACAAAAGGGTATTGCAAAGAGTTGGATGGTAGTATTTGAAACAGGTGAATCACGTGTCGAGGATATCGACAAACACTCCATCATGCGACGAACAGGTTTACCTGCACGTGACCTTAGAGTCTTTGATACAAAGCTTTCTCAGCCTTCTTCTATCTTAGGACGAGAAAAAGCCATTATTGTTAACTTAGAACACATTAGAGCGATTATCACTTCGAATGAAGTGCTTATGATTAATTCAATTGACCCTTTCTTTATTCGCTTTCTTCAAGATCTTCAAAAGCGTGTTCTTCTTTCTAATAATATTCAAGTGCCCATGCGGGGGAGCGATGACGTTGATAGTCATTGTGAAGTCAAACCTTTGTTGGAGGAGTTGTTGCCATCGGTGCAGAGTCCTACTCATTTTCCAAATAATGAATCAATTGGCGTAGCAGGTGTGTCGGCTCCTAAGCAGCTTCCGTTTGAGTTCAAAGCTCTTGAGTCTTGTATTGAATCTGCTTGTACCTGCCTTGAATATGAGACTCAAAGACTCGAAGAAGAGACTTACCCAGCTTTGGGTGAATTGACCTCTCAAATTAGTACTCTCAATCTTGAACGTGTAAGGCAGATCAAGACTCGTCTGGTTGCACTTTCTGGTCGTGTACATAAGGTCGCATATCAAATCGAAAATTTGTTGGATGATGATAATGACATGGCTGAAATGTACTTGACACAAAAGCTTGATGCTCAGTTATCAGACCAAACATCAGTAAAAGAAGCGTACAATGAAGCATTTGACGAAGATATAGACAAAAGTGAAAGATCATATTCGGATACATACAAATCCTATGATCATAAGCCTGATGTTGAAGAATTGGAAATGCTTTTAGAAGCATATTTTGCACAGATAAATGGAATCTTGCAAAAATTGTCCACTCTGAGTGAGTATGTGGGTAATACAAAGGACTACATCAACATAATGTTGGATGATAAGCAAAATCAGCTTCTACAAGCATCAATAATACTCAACACAATGAACTTCATAGTCAATTTGGGTATTCTGGTTGTTGGAGTGTTTGGCATGAATATTCATATTGATCTCTATCAAGGACAACCTAGTCAATTTTGGGCCACAACTAGTGGCACAGTCTTAGGTTGCGTGTTATTATTCCTTGTTTCTATTTGGTGGGGAAAAAGATATTTGCTCCCTCAATAG 1275 0.3937 MGMLSKEEKEKAAVGMAATMVATVRGSKQKGIAKSWMVVFETGESRVEDIDKHSIMRRTGLPARDLRVFDTKLSQPSSILGREKAIIVNLEHIRAIITSNEVLMINSIDPFFIRFLQDLQKRVLLSNNIQVPMRGSDDVDSHCEVKPLLEELLPSVQSPTHFPNNESIGVAGVSAPKQLPFEFKALESCIESACTCLEYETQRLEEETYPALGELTSQISTLNLERVRQIKTRLVALSGRVHKVAYQIENLLDDDNDMAEMYLTQKLDAQLSDQTSVKEAYNEAFDEDIDKSERSYSDTYKSYDHKPDVEELEMLLEAYFAQINGILQKLSTLSEYVGNTKDYINIMLDDKQNQLLQASIILNTMNFIVNLGILVVGVFGMNIHIDLYQGQPSQFWATTSGTVLGCVLLFLVSIWWGKRYLLPQ* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3327 424 PANTHER MAGNESIUM TRANSPORTER MRS2-F 23 421 - -
Mtr8g3327 424 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 23 421 IPR039204 -
Mtr8g3327 424 Gene3D - 20 108 - -
Mtr8g3327 424 Gene3D Magnesium transport protein CorA, transmembrane region 115 355 - -
Mtr8g3327 424 CDD Mrs2_Mfm1p-like 36 419 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3327 Mtr-Chr8 43755421 43758396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3327 35 418 MRS2 Gene Family AT3G19640 45.035 7.28e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3327 - K16075 gmx:100808805 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3327 8 43755421 43758396 Mtr8g3327 8 43755421 43758396 ECH