Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3326 ATGTCGAAATCCTTAGCCTTAATTACTATCATGTTGGTGATTATTGCAACAATTATTGTCCCTACACATTGTCAACATGTAGATTGGAGTCCCACAAAGACAACAGTACGTATTTCAAATGATATGGGCACTGTTGTTGATGTGCATTGTAAATCAAAAGACGATGATCTTGGCAGCCATGATCTTTATCAAGGTGAAATTACAGAATGGTCTTTTCGTGCCAACATTCGTGGCACCACTTTGTATTCGTGCGTCCTTAAATGGGACAGTGTGACAAAGAACGTAGTAATTTATGATGCTAAGAAGGATGAAGATTTGTGTATTACCAAATGTTGGAGAGTTCTTAGAACTGATGGAGTCTATTTTTATAATCAGAATAGAAACTCGTGGGACAAAAGATATGAATGGTAA 411 0.3674 MSKSLALITIMLVIIATIIVPTHCQHVDWSPTKTTVRISNDMGTVVDVHCKSKDDDLGSHDLYQGEITEWSFRANIRGTTLYSCVLKWDSVTKNVVIYDAKKDEDLCITKCWRVLRTDGVYFYNQNRNSWDKRYEW* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3326 136 PANTHER - 14 128 IPR010264 -
Mtr8g3326 136 Pfam Plant self-incompatibility protein S1 35 136 IPR010264 -
Mtr8g3326 136 PANTHER PLANT SELF-INCOMPATIBILITY PROTEIN S1 FAMILY 14 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3326 Mtr-Chr8 43737620 43738030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3326 19 136 Carbohydrate Esterase AT3G16970 34.146 4.04e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3326 - - mtr:MTR_8g094810 275.404