Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3317 ATGGGCAAGGAAAATGAGTCACCTGTTAAGAAAGAAGAAGTTAGCGATGATGGCTCCTCGAATGTTGAGATGAGAGATTTAGAATCTCAATCTCGACTTAGTTTGGAGAGGGAGATGGGCTTGGCGAGTTGCCGCGTGTGCCAATGCGCCGAGTCTGATAAACGAGGAGATGCTGCCCTAGAATTTTTGGGCATCACCCCAGTTATAGAAAGCAAAGGGGAAGTAAAGTTGGATGGCAAGGAAATTCCAAAAGACACTACACCTAAAAAAAACTTTGAATGCAAACCCGGGATGATGGAATTTGTAGGACCTAACGGGGAGGTTTTTGTATGTAAGAATGATTTGGAAATTGGTTTGTCTCATGAAGATAGGTTAATTGAACTTGGTTGTTGTTGTAAAAACGACCTTGCTTTAGTACACTATGCTTGTGCGCTCAAGTGGTTTATCAATCATGGATCTACAATTTGTGAAATATGTGGACATATAGCAAATAATATCAGAATAGCTGACTTCAACAAGGTTATTGGTTCCTTAAAAGAATATGAAGCACTGAGGGAAAGAACTGTCAATGGAGATCTAGGTCCCGCACAAGATCATCCAAATACTGGTGTGGATCCTGATGCTGTGGCTGCTATCCGAAGGCAACGGTTAAGTGAAATTGCACTATGGTTTTGTCCTCATAATAGCAATAACTTTAACAACAATAGCAATGTGGACTCAGTTTCACAACTTGTTTCTGAACAGCCGTTGAATTTTATTGTCGAAGAACCTGAACCCGTACAGAATACCCGAACTAAGTGGGCTGTAGAATGTACAGGGATCTTGCTTGCTACAGGGTTGCTTACCATCACCCTTGCATGGCTTATAGCTCCTCGTGTTGGAAAGAAAACTGCAGGAAGCGGTCTTCATATCCTTCTCGGTGGTGTTTGTGCTTTAACAGTGGTGATTTTTTTCCGCTTTTTTGTGCTTACAAGAATCAGGTATGGACCTGCACGTTATTGGGCAATATTATTTGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCACGGACGCACAGTGCTCATACAACGTGA 1077 0.4188 MGKENESPVKKEEVSDDGSSNVEMRDLESQSRLSLEREMGLASCRVCQCAESDKRGDAALEFLGITPVIESKGEVKLDGKEIPKDTTPKKNFECKPGMMEFVGPNGEVFVCKNDLEIGLSHEDRLIELGCCCKNDLALVHYACALKWFINHGSTICEICGHIANNIRIADFNKVIGSLKEYEALRERTVNGDLGPAQDHPNTGVDPDAVAAIRRQRLSEIALWFCPHNSNNFNNNSNVDSVSQLVSEQPLNFIVEEPEPVQNTRTKWAVECTGILLATGLLTITLAWLIAPRVGKKTAGSGLHILLGGVCALTVVIFFRFFVLTRIRYGPARYWAILFVFWFLVFGIWASRTHSAHTT* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3317 358 ProSiteProfiles Zinc finger RING-CH-type profile. 103 166 IPR011016 GO:0008270
Mtr8g3317 358 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 15 357 - -
Mtr8g3317 358 PANTHER ZINC FINGER, RING-CH-TYPE 15 357 - -
Mtr8g3317 358 SUPERFAMILY RING/U-box 120 162 - -
Mtr8g3317 358 Pfam RING-variant domain 122 159 IPR011016 GO:0008270
Mtr8g3317 358 MobiDBLite consensus disorder prediction 1 32 - -
Mtr8g3317 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 162 IPR013083 -
Mtr8g3317 358 SMART ringv_2 110 160 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3317 1 348 C3H Transcription Factor Family AT5G08750 61.625 1.79e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3317 - - gmx:100805323 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3317 8 43639809 43644666 Mtr8g3317 8 43639809 43644666 ECH