Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3316 ATGAAAACCCTCTGTCTTCCGCCGTTGCTTGCTCCCAGTGCCCTGGTTGGTGGCAGAGACTTTGCAAACAATTTAACAACTAAGTGCTTTCCCAAGCAACTTCATTTCAACTCTCGCTCGGTTGTTTTTGCTTCACACTTGTGTTATGCAACTCTATCTGTGGAATCAGAAGCAGAAAAGAAACAAGTATTTGATGGAGAGAAGGCTTATTTGCTTGTTAGAGAGCTCAGGAAGAATTTTGATACTGGCAAGACAAAGAGCTACGAATGGCGGATTTCCCAATTGGAGGCCATAGTGAAGATGTTAGAAGAGAAAGAGAAGGAAATTATTGATGCTCTTCATACAGACCTTTCTAAACCTAGACTAGAAGCATATATAACCGAGATTGTCCAGGCGAAATCATCATGTGATGAAGCACTTCAAGAACTGAAACACTGGATGAAACCTGAAAAGGTGAGTACTTCAATCACAGCATTTCCATCATCAGCAGAGATTGTGTCAGAACCACTAGGAGTTGTGTTGATCATATCAACATGGAACTTTCCTATGTTGTTATCATTGGATCCAGTCATTGGAGCCATTTCCGCGGGCAACGCAGTGGTTTTGAAACCATCAGAAGTTTCTCCTGCAACATCATCTCTGCTTGCAAATTTGCTAGAAAGTTATCTAGACAATTCTGCAGTAAGAGTTGTCGAAGGGGCTGTTCCTGAAACAACTGCACTCCTGGACCAGAAGTGGGATAAGATACTTTACACAGGTAGTGCTAGAGTAGGTCGCATTGTTATGGCTGCTGCTGCGAAGCATCTTACTCCAGTGATTCTTGAGCTTGGAGGAAAGTGTCCAGCTGTTGTTGATTCAAATGTCAACTTACAATTCACTGCGAGGAGGATAATAGCTGGCAAATGGGCATGCAATAGTGGACAAACATGCATTTCTGTTGATTATATCATCACAACCAAAGACTTCGCTCCAACGCTTGTAGATGCTTTAAAGGAAGAATTGGAGCAGTTTTTTGGGAAAGATCTGATAGAATCGAAAGACATGTCTCGTATTGTGTCTCCAACCCAATATGCACGACTCGTGAAACTCTTGGATGAGGATAAGGTATCAGACAAAATTGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAGATTGCGCCAACTATCTTATTGGATGTTCCACAAGAAGCTATGGTTATGCAAGAGGAGATATTTGGGCCGATTTTGCCAATTATTACTGTAGACAGCATTGAAGATAGCTTTAGTATAATACAATCAAGGCCAAAGCCTTTGGCTGCATATCTCTTCACAAACAATGAGCAACTTAAGAAGGATTATGTGGACAAGATATCTTCTGGAGGGATGCTCATCAACGACGCTGTCATACATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGGAGAAAGTGGAATGGGCTGCTACCATGGAAAGTTCTCTTTTGATAGTTTCAGCCATAAGAAATCAGTTTTATATAAAACTTTTGATTCCGATCCATCCATAAGGTATCCCCCATATACACCTGAGAAGGAAAATATTTTGAGGGCTATTTTTGGTGGCAATATTTTTCAGATAATTCTTGCTTTGCTTGGATGGTCTAAACGATGA 1632 0.4112 MKTLCLPPLLAPSALVGGRDFANNLTTKCFPKQLHFNSRSVVFASHLCYATLSVESEAEKKQVFDGEKAYLLVRELRKNFDTGKTKSYEWRISQLEAIVKMLEEKEKEIIDALHTDLSKPRLEAYITEIVQAKSSCDEALQELKHWMKPEKVSTSITAFPSSAEIVSEPLGVVLIISTWNFPMLLSLDPVIGAISAGNAVVLKPSEVSPATSSLLANLLESYLDNSAVRVVEGAVPETTALLDQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNVNLQFTARRIIAGKWACNSGQTCISVDYIITTKDFAPTLVDALKEELEQFFGKDLIESKDMSRIVSPTQYARLVKLLDEDKVSDKIVLGGQRDEKKLKIAPTILLDVPQEAMVMQEEIFGPILPIITVDSIEDSFSIIQSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVIHVATRGLPFGGVGESGMGCYHGKFSFDSFSHKKSVLYKTFDSDPSIRYPPYTPEKENILRAIFGGNIFQIILALLGWSKR* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3316 543 SUPERFAMILY ALDH-like 73 514 IPR016161 GO:0016491
Mtr8g3316 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 496 IPR016162 GO:0016491
Mtr8g3316 543 Coils Coil 122 142 - -
Mtr8g3316 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 478 IPR016163 GO:0016620
Mtr8g3316 543 PANTHER ALDEHYDE DEHYDROGENASE 41 542 IPR012394 GO:0006081
Mtr8g3316 543 Coils Coil 85 112 - -
Mtr8g3316 543 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 41 542 - -
Mtr8g3316 543 PIRSF ALDH 53 537 IPR012394 GO:0006081
Mtr8g3316 543 Pfam Aldehyde dehydrogenase family 72 498 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3316 Mtr-Chr8 43632729 43637415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3316 17 542 Aldehyde Dehydrogenase Gene Family AT4G34240 63.688 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3316 K00128 - gmx:100800699 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3316 8 43632729 43637415 Mtr8g3316 8 43632729 43637415 ECH