Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3283 ATGCCGGTGTGGTGGAGTAAAAAGTCGTCAAAGAATAAACAAGAGCGTAATAACATCAACAACGAAGAAGAAGACGATGAAGAAGAACAAACACGTGGCGGTGGTGTTCTTCAATTCAATTTCATGATGAAATCACCGATCAACGCTATAAGAAACAACGGCGATATTAAGAAGAAGAGCAACTGTAACAATAAGAAGAAGCCCAAGAGTTTCGATGAAGTTTTCAATCGGAATTCACCGAGGACTAGCAGGGAATTTGATGGCGGCGCCGCCACCGAAAAGCAAGGAGTTCCGTTGCCGCTACCTGTAAACTCCGATCAGGCTTTGGGATCCTTTTCCGTCTCTGGTTCTAGCGTCAGTTCTTCTACCTCTTTCGATGATCATCCAATTTCACCTCATTTCATTTCTAATAATAGAGGACAAGATGAAGTGAAGTTCAATGTGAGGTCAAGAAGTCCAGGTCCTGCGTCAAGAGGACCTACCAGCCCTACTTCGCCTCTTCATCCAAACGCATCAAGAGGACCCACTAGCCCTACATCACCTCTTCATCCAGCCGCGTCAAGAGGTCCCACTAGCCCCACATCACCTCTTCATCCAAATGCGACGAGAGGACCGACCAGCCCTACATCACCTCTTCATCCAAATGCGACGAGAGGACCGACTAGCCCTACATCACCTCTTCATCCAAATGCGACGAGAGGACCTACTAGCCCTACATCACCTCTTCATCCAAGGTTGCAGGGTTTGAATCTTGATTCACCTACGGGAAAGCAAGACGACGGAAGGAGTCAATGTCACCCATTGCCTCTTCCACCAGGATCTCCAACTAGTCCTTCTTCCGCTCTTTCCAACACACGGTCACCGTTCGAAAACAGTAGCCCTAACCTCTCCAAGTGGAAGAAAGGAAAGCTTCTTGGCCGGGGAACATTTGGGCATGTTTATCTTGGATTCAATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAGGGTTGGCTGTGACGATCAAAATTCAAAAGAGTGCCTCAAACAACTTCACCAGGAGATAGATTTGCTTAATCAGCTTTCGCACCCAAATATTGTTCAATACCTCGGGAGTGAACTGGGAGAGGAGTCACTTTCTGTTTATTTGGAATATGTCTCTGGTGGTTCTATCCATAAATTACTTCAGGAATATGGCCCATTCAAGGAGCCTGTTATCCAAAACTACACCAGGCAGATTGTCTCTGGACTTGCCTATCTACATGGGAGAAATACAGTACACAGGGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAACTAGCAGACTTTGGAATGGCTAAACATATAACTTCTGCTGCCTCAATGCTTTCATTCAAAGGAAGTCCGTACTGGATGGCACCTGAGGTTGTAATGAACACAAATGGATATAGCCTTCCGGTTGATATATGGAGCTTGGGTTGCACACTTATTGAGATGGCAGCGTCAAAGCCTCCGTGGAGTCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTATAATTCCTGAGCATCTTTCAAATGATGCGAAGAATTTCATTATGTTATGTTTACAGCGAGACCCATCAGCTCGTCCAACAGCCCAAAAATTACTAGAGCACCCTTTCATTAGAGATCAATCAGCAACAAAAGCTGCAACCAGAGATGTTTCCTCTTACATGTTTGACGGAAGCCGAACACCGCCTGTTTTAGAGCCTAATTCCAATCGAAGAAGTATAACTTCATTTGATGGAGACTATGCAACAAAGTCAGCTATTGCAGCTCCACGTACAACAAGGAGTCCAAGAGATCACTCAAGAACGATCACATCTTTACCGGTATCTCCCTCTTCAAGTCCATTGCGACAATATGGACAGGAACATAGGAGTTGTTTCTATTCTCCTCCTCATCCATCTTACACAATTTTGGGACAAAATAGTTACACCTTGAATGATACACCCTCTTATCCAGTGAGATCGAATGCACCGTTTACTCTTGATCCTTGGCATGAAACATCTAGATACAAAGCCCATACACCACCTGGTGGATCTCCAAGAATGAGATTCATTTGA 2106 0.4449 MPVWWSKKSSKNKQERNNINNEEEDDEEEQTRGGGVLQFNFMMKSPINAIRNNGDIKKKSNCNNKKKPKSFDEVFNRNSPRTSREFDGGAATEKQGVPLPLPVNSDQALGSFSVSGSSVSSSTSFDDHPISPHFISNNRGQDEVKFNVRSRSPGPASRGPTSPTSPLHPNASRGPTSPTSPLHPAASRGPTSPTSPLHPNATRGPTSPTSPLHPNATRGPTSPTSPLHPNATRGPTSPTSPLHPRLQGLNLDSPTGKQDDGRSQCHPLPLPPGSPTSPSSALSNTRSPFENSSPNLSKWKKGKLLGRGTFGHVYLGFNSENGQMCAIKEVRVGCDDQNSKECLKQLHQEIDLLNQLSHPNIVQYLGSELGEESLSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHITSAASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTLIEMAASKPPWSQYEGVAAIFKIGNSKDMPIIPEHLSNDAKNFIMLCLQRDPSARPTAQKLLEHPFIRDQSATKAATRDVSSYMFDGSRTPPVLEPNSNRRSITSFDGDYATKSAIAAPRTTRSPRDHSRTITSLPVSPSSSPLRQYGQEHRSCFYSPPHPSYTILGQNSYTLNDTPSYPVRSNAPFTLDPWHETSRYKAHTPPGGSPRMRFI* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3283 701 MobiDBLite consensus disorder prediction 51 301 - -
Mtr8g3283 701 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 232 682 - -
Mtr8g3283 701 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 170 - -
Mtr8g3283 701 Pfam Protein kinase domain 300 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3283 701 ProSiteProfiles Protein kinase domain profile. 299 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3283 701 MobiDBLite consensus disorder prediction 1 35 - -
Mtr8g3283 701 MobiDBLite consensus disorder prediction 106 143 - -
Mtr8g3283 701 MobiDBLite consensus disorder prediction 277 298 - -
Mtr8g3283 701 MobiDBLite consensus disorder prediction 58 80 - -
Mtr8g3283 701 MobiDBLite consensus disorder prediction 605 634 - -
Mtr8g3283 701 SMART serkin_6 299 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3283 701 MobiDBLite consensus disorder prediction 616 634 - -
Mtr8g3283 701 PANTHER MAP KINASE KINASE KINASE 1 170 - -
Mtr8g3283 701 PANTHER MAP KINASE KINASE KINASE 232 682 - -
Mtr8g3283 701 CDD STKc_MEKK1_plant 298 555 - -
Mtr8g3283 701 Gene3D Transferase(Phosphotransferase) domain 1 296 579 - -
Mtr8g3283 701 SUPERFAMILY Protein kinase-like (PK-like) 297 635 IPR011009 -
Mtr8g3283 701 MobiDBLite consensus disorder prediction 154 260 - -
Mtr8g3283 701 Coils Coil 12 32 - -
Mtr8g3283 701 ProSitePatterns Protein kinases ATP-binding region signature. 305 328 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3283 Mtr-Chr8 43343146 43348027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3283 215 614 MAP Kinase Kinase Kinase AT1G53570 66.339 1.39e-173 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr8g3283 Pkinase 3.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3283 K04421 - gmx:100813122 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3283 8 43343146 43348027 Mtr8g3283 8 43343146 43348027 ECH
Mtr8g3283 8 43343146 43348027 Mtr3g3349 3 47442658 47447590 PCT