Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3261 ATGGAATTCTTAGACGAAGACGCGAAACCGAAGTTCCTGTATCAGTCCGGTGCACCGGCGGCCACTGAATCACAGCCTTACCAGAAACCAACGAAATCGTTCATCGCTGTAACCTTTTCAATCTCTTCAATCTTCTTCGGTCTCGCTTTCTTCGTGTTCCAATCTGAGCCGCTCAAATCGATTTTCATCTGGTTTGCATTGTCTCTCCTCCTTGGTCCTTTCGCTCCAATCTCTATCACCGGCGGCGATTCCCGTGTCGGCCGTGGTCATGCCGTCAATTTCCCCGATCAGGAAACATCAACCGATGAGGATGATTCCAGGAAAAAATCTCAGCAGCGCAGATCCAAGCAACGCAGATCGGACGATGTCACCGCTGTAGTAGCTCCGGCGCCGGTGGTTTCGTTGAAGAATCGAAATGGAAATGGAAACGGTGTTGCATTGGCGGCGGTGGTGGAAGAGGAGAAGGAATGGAACGAAGACGACATTGAGATTCTGAAGAAACAGATGGTGAAAAATCCACCGGGGAAACCAGGACGGTGGGAGGCGATAGCGGAGGCATTCGGAGGGCGGCACAAGGCGGAGAGTGTGGTGAAGAAATCAAAGGAGTTGGGAGAGAAGAAGGTTGATGATTCGGATTCGTATGAGCAGTTTCTGAAGAAGAGAAAAGCGTTGGATAAGAGACTTGTTGAAGAAGGAGGAGATTTAGCTACGGTTGAGAAAGTTGAAAGTGTTTGGAGTTCAAATGAGGATATTGCTTTGTTGAATGCTTTGAAAGCCTTTCCGAAAGATGTTGCTATGAGATGGGAGAAAGTTGCTGCTGCTGTTCCGGGGAAATCAAAAGCTGCTTGTATGAAAAGAATTGCTGAATTGAAGAAAGGGTTTCGGACTTCGAAATCTGGTTCTGAAGTTTAG 912 0.4792 MEFLDEDAKPKFLYQSGAPAATESQPYQKPTKSFIAVTFSISSIFFGLAFFVFQSEPLKSIFIWFALSLLLGPFAPISITGGDSRVGRGHAVNFPDQETSTDEDDSRKKSQQRRSKQRRSDDVTAVVAPAPVVSLKNRNGNGNGVALAAVVEEEKEWNEDDIEILKKQMVKNPPGKPGRWEAIAEAFGGRHKAESVVKKSKELGEKKVDDSDSYEQFLKKRKALDKRLVEEGGDLATVEKVESVWSSNEDIALLNALKAFPKDVAMRWEKVAAAVPGKSKAACMKRIAELKKGFRTSKSGSEV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3261 303 MobiDBLite consensus disorder prediction 86 123 - -
Mtr8g3261 303 ProSiteProfiles Myb-like domain profile. 237 291 IPR001005 -
Mtr8g3261 303 PANTHER TRANSCRIPTION FACTOR MAMYB 1 302 - -
Mtr8g3261 303 SUPERFAMILY Homeodomain-like 241 287 IPR009057 -
Mtr8g3261 303 SUPERFAMILY Homeodomain-like 154 193 IPR009057 -
Mtr8g3261 303 MobiDBLite consensus disorder prediction 100 121 - -
Mtr8g3261 303 Gene3D - 151 209 - -
Mtr8g3261 303 SMART sant 241 293 IPR001005 -
Mtr8g3261 303 SMART sant 153 206 IPR001005 -
Mtr8g3261 303 Gene3D - 237 302 - -
Mtr8g3261 303 CDD SANT 245 286 IPR001005 -
Mtr8g3261 303 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 302 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3261 Mtr-Chr8 43064552 43065801 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr8g3261 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3261 - - gmx:100780658 356.681