Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3258 ATGGCTCTTTTCAACGATATGGAATCACTTCCCAGCCAATTCCCAGAGGATTTAAATGTTCTTGTGGTTGATCATGACACTGATGTCCTTAATGCTGCTGTGGAAATGTCTATTCCATGTAATTATCAAGTTACCACATGTTCTAAGGCTTCTTTTGCCTTTAAACTTTTGACGGAAACGAAGGGCTGCGTTGATGTGGTACTAATTGAAGCTCAAATGCCAGACATGGATTCATATGATTTTGTCCGACATGTTACCCAACAAATCAATATTTCTGTCATCATGATGTGTGATGATGGATCAACAAATGCAGTGATGAAAGCTGTTACAAACGGGGCTTGCGAATTTTGGATTAAGCCTTTCATCGAGAATCAAATCAAGAACATGTGGCAGTGTGTTGCAAGGAAAGTTTGGAATGAAAATAAACATGATCTTGGAATCTTGAAGGTAAAAAGTCAAAGCAAAAGGGGAAGTGATTATAATGCTGATTTTCAACCCCTAACAAAGAAATCGTATATCATGAACTTGGCCTTGATAAGGCAAAGCCAAAAGCAATTCATGAAGCGATGA 570 0.3825 MALFNDMESLPSQFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVLIEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKNMWQCVARKVWNENKHDLGILKVKSQSKRGSDYNADFQPLTKKSYIMNLALIRQSQKQFMKR* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3258 189 SUPERFAMILY CheY-like 16 141 IPR011006 -
Mtr8g3258 189 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 12 173 - -
Mtr8g3258 189 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 173 IPR045279 GO:0009736
Mtr8g3258 189 Gene3D - 12 141 - -
Mtr8g3258 189 CDD REC_typeB_ARR-like 20 134 - -
Mtr8g3258 189 Pfam Response regulator receiver domain 20 129 IPR001789 GO:0000160
Mtr8g3258 189 SMART REC_2 18 130 IPR001789 GO:0000160
Mtr8g3258 189 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3258 Mtr-Chr8 43041690 43043026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3258 14 146 Response Regulator Gene Family AT4G16110 41.176 7.70e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr8g3258 Response_reg 2.3e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3258 - K14491 mtr:MTR_8g093040 367.851