Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3250 ATGGAATTGACAGAGGATGAAGCTAATAAAATAGGTGGTGTACAACATGATGGAGTGGTGTTTGTCTTTCCCAATGAAAAAAGACAGCTCCTTACCACAAGATCGTGGGATTTTATTGGCTTGCCATTATCTGTGGAGAGGGCACATTCTGAAAGTGATATTATCATTGGAGTGATTGATTCTGGAATTTGGCCAGAATCTTCCAGTTTCAATGTTGAAGGATTGAGCTCACCACCTAGAAAATGGAAATGCGCTTGTCAAGCTATTGAATTCAAATCTAGACACTATAAAAGTTATTATCCAAAAGACTTCTTCAAGGAAAATATTGTATCTCTTGGAGATACAAGTGAGCATGGGACACATACAACATCAACAGCGGTTGGGAACCCAGTTAGCATTGCAAATATGTTTGGCCTCAGAAAAGGAACAATAAAAGGCGGAGCTTCATCAGCACGAATCGTTGTTTATAAAATTAACACGGTTATAGACGCAAATGGGTTGGTTTTGGAACAAATTAATTCGGAGATTACCACGGTTGGTCTGATTCGACATCGGAACATTCTACCACTGTTGGTTCATATTCGTAGATCTGACTGTCATTACATGGTGTACGAGTACATGAAGAACAGGAGTTTGCACAATATGTTGAAAAAATTTGAAAGAGGAGAAAAGGAGTTTGACTGGTTGTCAAGGTATAAGATCGCAACTCATAGAAGTGTTGATCATGCCTCTGAAACATGGGGATATATGGCGCCAGGGTATAACCAATACGGATGCAGTAGTGATAAGAGTGACATATATAGTTTTGGTGTTATTCTTGGTGTTTTGGGCACTTCTCTTAATACGTTTGACCTAAAAGGAAAATTGTATCCAATTATCTATAGCAGAGATGTACCAAATAAGGGAGCAGGCTTTAATGGATATTCATCCAGGTATTGA 939 0.3866 MELTEDEANKIGGVQHDGVVFVFPNEKRQLLTTRSWDFIGLPLSVERAHSESDIIIGVIDSGIWPESSSFNVEGLSSPPRKWKCACQAIEFKSRHYKSYYPKDFFKENIVSLGDTSEHGTHTTSTAVGNPVSIANMFGLRKGTIKGGASSARIVVYKINTVIDANGLVLEQINSEITTVGLIRHRNILPLLVHIRRSDCHYMVYEYMKNRSLHNMLKKFERGEKEFDWLSRYKIATHRSVDHASETWGYMAPGYNQYGCSSDKSDIYSFGVILGVLGTSLNTFDLKGKLYPIIYSRDVPNKGAGFNGYSSRY* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3250 312 Gene3D Transferase(Phosphotransferase) domain 1 234 299 - -
Mtr8g3250 312 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 2 167 - -
Mtr8g3250 312 SUPERFAMILY Subtilisin-like 23 160 IPR036852 GO:0004252|GO:0006508
Mtr8g3250 312 Gene3D Transferase(Phosphotransferase) domain 1 173 233 - -
Mtr8g3250 312 Pfam Subtilase family 52 159 IPR000209 GO:0006508|GO:0008236
Mtr8g3250 312 SUPERFAMILY Protein kinase-like (PK-like) 149 279 IPR011009 -
Mtr8g3250 312 Gene3D Peptidase S8/S53 domain 53 159 IPR036852 GO:0004252|GO:0006508
Mtr8g3250 312 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 167 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3250 Mtr-Chr8 42997772 43001169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3250 3 158 Subtilisin-like Serine Gene Family AT5G59190 44.937 1.79e-35 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Mtr8g3250 Peptidase_S8 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3250 - - mtr:MTR_8g092940 298.516