Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3216 ATGTCCCAAATTATTGACCACCACTTATTTGAGGAGGAGAATCAGATTTCCACACAAATGGGGTTCATTCCTTTCCCAACAAACCTTACTTTCCCTTCTTTAGATTGCAATCAATCTTTGAAAGCCTTCAGTTCCATAGCTTCTTCACTTACATCTGAATCAGATTCTACATCAAACCTAACACAAACCCTACTCACAACCAATCCTCAAAAATCAAAAGAATACCTCACTTCTAGCTTTGGAGGAAGTACTCCATTCCTATCCTTGCATGGATCCATTGTAAATCCATGGGCAATATTGGGAGGAGAAGTAATAAGTAATTGCATGAATAATAGTGGTAAAAGAAATGGAGTAGATCATCGTGATAATCATTTGGGTGTTTCTACTACCATGAAAATGAAGAAAATGAAGGGAAGAAAGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAAACATTGAGTACTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAAAAAGTTGTAAAGAACACCCAACATCCCAGAAGCTATTACCGTTGCACACAGGAGAATTGTCGTGTAAAGAAACGTGTGGAGCGCTTAGCTGAAGATCCAAGGATGGTAATAACAACATATGAAGGAAGACATGTACACTCTCCTTCCAATGATCTTGAAGACTCTCAAACTCAATCTGACAATTTCTTATGGTAG 705 0.3858 MSQIIDHHLFEEENQISTQMGFIPFPTNLTFPSLDCNQSLKAFSSIASSLTSESDSTSNLTQTLLTTNPQKSKEYLTSSFGGSTPFLSLHGSIVNPWAILGGEVISNCMNNSGKRNGVDHRDNHLGVSTTMKMKKMKGRKKVREPRFCFKTLSTDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQTQSDNFLW* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3216 234 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3216 234 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3216 234 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g3216 234 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 40 228 - -
Mtr8g3216 234 MobiDBLite consensus disorder prediction 211 234 - -
Mtr8g3216 234 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3216 234 Gene3D WRKY domain 145 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g3216 234 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 228 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3216 Mtr-Chr8 42655834 42658073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3216 125 234 WRKY Transcription Factor Family AT4G39410 74.359 3.05e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g3216 WRKY 6.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3216 - - pvu:PHAVU_002G266400g 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3216 8 42655834 42658073 Mtr8g3216 8 42655834 42658073 ECH