Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3213 ATGGCTCCTCTTACACTCTCCGTTACGGTGCAAGATTCTGCCTCCGATGCTTGTACTAAGAGAAAGCAGAACTTAATTCTGAAAAATTCTTTTGCATCTGTTAGTGTGGGACAAGAAAAGCCATTTGACTTCTTACGCACTTTATTCGAGGGTGTTATCGCAGGAGGTACAGCTGGAGTTGTTGTCGAAACAGCTTTATACCCCATTGACACTATAAAAACACGTCTGCAGGCTGCTCGCGGAGGAGAAAAACTATTATTGAAAGGCCTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTTTATTTGTTGGAGTTTATGAACCTGCAAAGCAGAAATTGCTAAGGATGTTTCCTGAAAATCTGAGTGCTTTTGCTCATTTGACTGCAGGTGCCATAGGAGGCATTGCTGCATCTTTTGTTCGCGTTCCAACAGAGGTTGTCAAGCAACGGATGCAAACTGGGCAGTTTACCTCAGCTTCTAATGCTGTTCGCTTTATTGCATCTAGGGAGGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTACTGCGGGATTTGCCCTTCGATGCTATTCAGTTTTGCCTCTATGAGCAGATTCGATTAGGTTACATGCTTGCGGCACGAAGAAATCTGAACGATCCAGAAAATGCAATTATTGGTGCTTTTGCAGGCGCACTAACTGGAGCTATAACTACGCCCCTTGATGTCATCAAAACAAGGTTAATGGTTCAGGGACCTGCAAACCAATATAAGGGAATTGTAGATTGTGTTCAAACCATTATTAAGGAAGAGGGCCCTGGTGCTTTTCTGAAGGGTATTGGGCCAAGAGTACTTTGGATAGGCATAGGTGGTTCGATATTCTTTGGCGTCCTTGAGAGTACAAAACGTTTCCTTGCTGAGAGGCGTCCTACACCTAAACTAGCTCAGTGCTGCACAAACTCGGAAAAAAAGTAA 975 0.439 MAPLTLSVTVQDSASDACTKRKQNLILKNSFASVSVGQEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLLLKGLYSGLAGNLAGVLPASALFVGVYEPAKQKLLRMFPENLSAFAHLTAGAIGGIAASFVRVPTEVVKQRMQTGQFTSASNAVRFIASREGFKGFYAGYGSFLLRDLPFDAIQFCLYEQIRLGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGPANQYKGIVDCVQTIIKEEGPGAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPTPKLAQCCTNSEKK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3213 324 Gene3D Mitochondrial carrier domain 48 315 IPR023395 -
Mtr8g3213 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 222 304 IPR018108 -
Mtr8g3213 324 SUPERFAMILY Mitochondrial carrier 49 299 IPR023395 -
Mtr8g3213 324 Pfam Mitochondrial carrier protein 222 307 IPR018108 -
Mtr8g3213 324 Pfam Mitochondrial carrier protein 48 82 IPR018108 -
Mtr8g3213 324 Pfam Mitochondrial carrier protein 127 208 IPR018108 -
Mtr8g3213 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 46 118 IPR018108 -
Mtr8g3213 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 209 IPR018108 -
Mtr8g3213 324 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 13 312 - -
Mtr8g3213 324 PRINTS Mitochondrial carrier protein signature 51 64 IPR002067 GO:0055085
Mtr8g3213 324 PRINTS Mitochondrial carrier protein signature 64 78 IPR002067 GO:0055085
Mtr8g3213 324 PRINTS Mitochondrial carrier protein signature 182 200 IPR002067 GO:0055085
Mtr8g3213 324 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Mtr8g3213 324 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 13 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3213 Mtr-Chr8 42605739 42611920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3213 125 310 Chloroplast and Mitochondria Gene Families AT1G07030 30.366 2.61e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3213 K15111 - gmx:100811130 549.28