Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3206 ATGGACTACTATTTTGTAAACCCTCATGCTACCCCAAACTTTGCTCACTCTACTCATATGATGATTCCTAATCCCTCTTCTGAGTTTATACTATCTGATTATCTTATGCTTGATGATATTTGTATTGATCACCATGATCAAGAATCTCGGTCACAAAGTACCGAATCATTAGAGAAGGTAACATTCAATGATGTCAATCAAGAATTCAATGATGCTACTTCTAAGAACAATAACATAAAATACAAAAATGGGATTAAGCGAAATAAAGGGGAAGCGGGGCAAAAGATAGCCTTTAGAACAAGATCAGAGCTTGAGATTATGGATGATGGATACAAGTGGAGGAAGTACGGGAAGAAGTCCGTGAAGAACAGTCCTAACCTAAGGAACTACTACAAATGTTCAAGTGTGGGATGTAATGTGAAGAAAAGGGTGGAAAGGGATAGAGATGATTCGAGCTATGTGATAACAAGTTATGAAGGTGTTCATAACCATGAGATTCCATTTACCTCCCACTGCAGCCAAATCTCTTTTGTTCATTCTGATGCATATAATTAA 555 0.3712 MDYYFVNPHATPNFAHSTHMMIPNPSSEFILSDYLMLDDICIDHHDQESRSQSTESLEKVTFNDVNQEFNDATSKNNNIKYKNGIKRNKGEAGQKIAFRTRSELEIMDDGYKWRKYGKKSVKNSPNLRNYYKCSSVGCNVKKRVERDRDDSSYVITSYEGVHNHEIPFTSHCSQISFVHSDAYN* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3206 184 Pfam WRKY DNA -binding domain 108 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3206 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 170 IPR044810 GO:0003700
Mtr8g3206 184 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 15 170 - -
Mtr8g3206 184 Gene3D WRKY domain 91 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g3206 184 SMART WRKY_cls 107 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3206 184 ProSiteProfiles WRKY domain profile. 102 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3206 184 SUPERFAMILY WRKY DNA-binding domain 99 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3206 Mtr-Chr8 42560285 42562464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3206 91 165 WRKY Transcription Factor Family AT5G64810 76.000 3.51e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g3206 WRKY 4.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3206 - - cam:101494195 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3206 8 42560285 42562464 Mtr8g3206 8 42560285 42562464 ECH