Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3200 ATGGATGATCTTTTTGACGATATTGTTCCTACTACTACTACGACTACACGTGCGAGAGGTAGGTTTGCGCCTAAGGCTAAACCCAAACCACCACCGCCTCAAAAGAATAATGTATCTGCATCAACCACTCACGAAGAATCTCAACTAATTTCTCCCAAAAATGATTCTCATAATGCTGACATCAATGTCAATAACGCGCAGTCAGTTCACCCTGCTAATGCTGTAGAGAATGTATTGAATAATGCGGCTGCTGTATCTACTACTGACTCAACCATAGGTAGTAACAAAGAACTGCCTACAAATGGGGAAGGTTCTTTTCTTGACAGCAACAAGAGTTTGGAAGTTATTGATAATTCATTAGAGGTTAGCCTAAACGCGGGCTTCAAAAGCGCTTCAGGCGACATTAACAATGGAATATCTGAGAGCGACTTACATTCAAGTTTTGAGTTTGGAGAAGTGCGAGAGGTCTTGTCTGCGGAAATCGAGCTGGATCCTTTCAGTGATGTCCTCCCTGATCCTGGAACCGGAAAGGCTAAAAAGTTTCAACCCAAGATTAAGCCACGACCTAGAGTCAGCAATACACCAGCTACTGCTTCTGCTTCATCTGGTATTCCATTTTCTGAAGATGATAGAAGCTTGGAAGCAGTTATTCCTTCCCATTCTGATTCCCTGAATGCTATGCCTTCAGAGTCTGCAGTTCACGATGGAACTAGAGATTTTCCTTCTAGCTTTGGTAAATCAGTTGCAGAGAATGCAGATATTTTTTCCGGGCTAGAATCACTCGATGACATTCTCAACCAAGATGCAACTGGTACAGCAAAACCAGATCTTAAATCTTTCAATGTGAATGGCGCGGAGGAAAAATTTGTCCTTCCAGGATACGATGGCAAAAGTAGGTCGGAAATACAGGAAGGCGCAGACTTGAACCCTGATCCTGACTGCCCCATTGACAATGTCTATGATGATTATCAATCCATGAAATCTGGCATTGATCCAACATCTGAAATTCCAAGGCATGAAGGCTTGACAAATTCTCCAGATAGTCCCACATTGGCTGACCTTTTGCAGCAAGACGATGCTGGAGAGAAAGAACTTTCTCAGGTTGCTAATGAGAGAAAAAAATCTCTAAAGAAGCATAAAATATCTTCTATTGCTGGTGTGGAGGATAAAGGTGGTAAATCCTCAAGGAAACCAAGAAAACAAGCAGCTAGTAAACCTACTAAAAACTCATTGAATGAGGCTGTTAACGGTGATGATGTCCTCGACCCTCCTTATGTTATTGATGGAGATGAACTTGAAGAAAATGACGATGATGACGACGTGGATTATTCATCCAAGAAGACAAGCGCATCAACAAGTTCAAAGAAGAAATCAGTGGCTAAAAAGGGAAAAACATCTAAAAAACGCAAGAAGGCTAATGATGATTCAGAAAAGGTTACTGAAGAACCTCCTAAAAAGTTCCCCCATGCATCTCGGCGAAGAAAAAGATGTGTGGACAAGGCTCTGCTGGAAAATGACTATCTTGATCAACGAACAATACCTATTAGGGATATTATTTTAATTGCAGAACATAAGGAGCGGTTGGCGAAAAAGGAGGCAACACCTTCGCAAACACCTTCCACCAATCAAAGTGATGGGGATTTTCATCATGATGTGGATTTTCATCATGAGGCTGATGCTAATTATGAAGAGGAGTTTTTTGGTTCAGACGATGAATTTAGAGACCTGGATGATGATGATCGAGCCACTGAAAAGATTACATCAACTACTCCTTTATTGAATTACCAGTCTTTCATGGACAAGGCACCTAGGGGAAAATGGTCAACACGAGATACTGAAAAGTTTTATGAGGCTATTAGGCAGTTTGGCACAGATTTTACTATGATACAACAGCTTTTCCCTGATAAAACACGTCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGACAACATCCTTTACTGTTAACTGATGCCATGAATAATCGTGGAAAAGATCTTTCTTTTTTTAAATTGGTGGTTGAGAAACAGAAACAAAATTCTAATAAGGAAGAAGATACTGCTGAAGATGCCTCAGATTTAATGATAGGGGAGGGTGAGGAGAATGAGGACCCAACACCTGGAACTAAGGAAGAGGTTGCAACAGCTGAGCAGGAGCAGGACCACATCAATGTTAAAGATCAAGAAGATTCTATGGCATATCCAGTTCCAGAGCAATCTGACGATAGTGACGATGGGTTACAAAATAATGAAGACGCATGGTATCATTATCAGAGTGCCATTTAG 2286 0.4099 MDDLFDDIVPTTTTTTRARGRFAPKAKPKPPPPQKNNVSASTTHEESQLISPKNDSHNADINVNNAQSVHPANAVENVLNNAAAVSTTDSTIGSNKELPTNGEGSFLDSNKSLEVIDNSLEVSLNAGFKSASGDINNGISESDLHSSFEFGEVREVLSAEIELDPFSDVLPDPGTGKAKKFQPKIKPRPRVSNTPATASASSGIPFSEDDRSLEAVIPSHSDSLNAMPSESAVHDGTRDFPSSFGKSVAENADIFSGLESLDDILNQDATGTAKPDLKSFNVNGAEEKFVLPGYDGKSRSEIQEGADLNPDPDCPIDNVYDDYQSMKSGIDPTSEIPRHEGLTNSPDSPTLADLLQQDDAGEKELSQVANERKKSLKKHKISSIAGVEDKGGKSSRKPRKQAASKPTKNSLNEAVNGDDVLDPPYVIDGDELEENDDDDDVDYSSKKTSASTSSKKKSVAKKGKTSKKRKKANDDSEKVTEEPPKKFPHASRRRKRCVDKALLENDYLDQRTIPIRDIILIAEHKERLAKKEATPSQTPSTNQSDGDFHHDVDFHHEADANYEEEFFGSDDEFRDLDDDDRATEKITSTTPLLNYQSFMDKAPRGKWSTRDTEKFYEAIRQFGTDFTMIQQLFPDKTRHQIKLKYKKEERQHPLLLTDAMNNRGKDLSFFKLVVEKQKQNSNKEEDTAEDASDLMIGEGEENEDPTPGTKEEVATAEQEQDHINVKDQEDSMAYPVPEQSDDSDDGLQNNEDAWYHYQSAI* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3200 761 MobiDBLite consensus disorder prediction 291 495 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 338 352 - -
Mtr8g3200 761 SMART sant 603 651 IPR001005 -
Mtr8g3200 761 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 179 743 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 36 69 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 1 69 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 703 728 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 528 548 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 88 107 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 469 488 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 424 440 - -
Mtr8g3200 761 ProSiteProfiles SANT domain profile. 606 650 IPR017884 -
Mtr8g3200 761 Gene3D - 607 690 - -
Mtr8g3200 761 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 179 743 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 168 205 - -
Mtr8g3200 761 CDD SANT 606 647 IPR001005 -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 357 372 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 381 396 - -
Mtr8g3200 761 MobiDBLite consensus disorder prediction 677 761 - -
Mtr8g3200 761 Pfam Myb DNA-binding like 597 681 IPR039467 -
Mtr8g3200 761 SUPERFAMILY Homeodomain-like 605 653 IPR009057 -
Mtr8g3200 761 Coils Coil 674 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3200 Mtr-Chr8 42489713 42496602 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr8g3200 Myb_DNA-bind_7 2.8e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3200 K15198 - gmx:100809837 521.546