Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3169 ATGGCACTCTCATTCTCACTCTGTTCAGGCACAACCGTTCATAACCGTTTTCCTTCTTGTATGAAATTGAATGGTAAAAGTTATAAAGTATCCGATAAAGTGTTATGTTCTGCACGTAACGGTAACGAAAAGAAGCCGTTAGTGGGAATTGGTATTGGAATTGTAGCAGCATGGGTAATGGGGTTAACAGCGTTGGATGCAGATGCAACGAGAATTGAATACTATGCTACTGTGGGAGAACCAATGTGTGAGCTTAATTATGTTAAATCTGGGCTTGGTTACTGTGATTATGTTGAGGGTTTTGGTGATGAAGCTCCTTTAGGAGAGCTTATTGATATTCACTATACAGCTAGGTTCGCCGATGGAATAGTATTTGATAGTAGTTATAAACGTGCTAGGCCTTTAACTATGCGTATTGGTGTTGGCAAGGTAATAAGGGGATTGGATCAGGGAATTTTAGGGGGTGAAGGAGTACCTCCAATGCGGATAGGTGGGAAACGCAAACTCACGATTCCTCCATTGTTAGCGTATGGTCCTGAACCTGCAGGCTGTTTCTCAGGTGACTGCAATATACCGGGTAATGCAACTCTTCTGTATGATATTAAATTTGTTGGTCTTTATTCGGGCAATCGAAGTCAATGA 642 0.4159 MALSFSLCSGTTVHNRFPSCMKLNGKSYKVSDKVLCSARNGNEKKPLVGIGIGIVAAWVMGLTALDADATRIEYYATVGEPMCELNYVKSGLGYCDYVEGFGDEAPLGELIDIHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRIGGKRKLTIPPLLAYGPEPAGCFSGDCNIPGNATLLYDIKFVGLYSGNRSQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3169 213 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 108 207 IPR001179 GO:0003755
Mtr8g3169 213 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 27 211 IPR044183 GO:0009507
Mtr8g3169 213 SUPERFAMILY FKBP-like 87 205 - -
Mtr8g3169 213 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 105 203 IPR001179 GO:0003755
Mtr8g3169 213 Gene3D - 81 206 IPR046357 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3169 84 208 Calmodulin-binding Proteins AT3G25230 37.795 1.42e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3169 K01802 - gmx:100500547 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3169 8 42225878 42228538 Mtr8g3169 8 42225878 42228538 ECH