Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3149 ATGCTTTTAATAAGTTGTAGAACTGATGTGGTTCAATCATACAGTTGTTCGCATTTTGATGGATTCTGGGACTGGGAAGCAATAGGTAACTTTAAAGATAAAGATAAAGTAGCAATACTGTCGCGTGGTATGGAGCCGTCAAAAAATGCAGGGGGTTACGAGATTGGAGAATATTACACTTTTGAGTTTAACCCTACTGCTGATGCTGACAGATACGAAAAAGAAGAACCATCAGACAATATATGCTTACTAAACATGAAAGTGATGATAAAGACCACGCCCTCGTTGTATAGAAGTATCAACGAGCTTTGCTGGTTAGATATCTCTAATTGTGAATCACTTACATGCCTACCAGCTGAACTTTTCAATTTGAATTCTCTGAGAAGACTTTATCTCGGTGGTTGTTTAAAGTTGGAGGAGTTACCTGAAATCGAGGAGACTATGGAAAATCTAACAGTGCTCATCTTAGACAAAACAGCAATAAAAGAATTACCTTCATCCTTGCACCATTTGGTCAGGCTTGAAGAGTTGAGCTTGCAAATGTGCACAAGACTTGAGACGATTCCATCTTCCATTGGAAGTCTCAGCAAACTCTTCAAGTTAGACCTTACCTACTGTGAATCACTTGAAACCTTTCCAAGCAGCATTTTCAACTTGAAGCTTACAAAACTTGATTTACATGGTTGCACAATGCTTAGTACCTTCCCAGAGATCTTGGAGCCTTCAGAAAGTTTTGCTCACGTTAACTTAACTAAAACAGCAATTAAAGACCTGCCTTCATCATTGGAGTTTTTGGTTGGGCTTCAAACCTTGCGCCTCAGATTGTGTAGTAATCTGGTGTCACTTCCTAACGGCATTGTTAATCTAAACCGTCTATCCCTGCTTGATTTCTCTGACTGTTGCAGATTAACAGGTATCCCAAATAACATTGGTCACTTGTCATCCTTGACAGAACTTTCACCACAAGAAAGCAGTATTGTGAACCTTCCTGAGAGTATGACTCATCTCTCAAGTTTGAAATCACTTGATTTAAGTGACTGCAAAAGGCTTGAATGA 1056 0.392 MLLISCRTDVVQSYSCSHFDGFWDWEAIGNFKDKDKVAILSRGMEPSKNAGGYEIGEYYTFEFNPTADADRYEKEEPSDNICLLNMKVMIKTTPSLYRSINELCWLDISNCESLTCLPAELFNLNSLRRLYLGGCLKLEELPEIEETMENLTVLILDKTAIKELPSSLHHLVRLEELSLQMCTRLETIPSSIGSLSKLFKLDLTYCESLETFPSSIFNLKLTKLDLHGCTMLSTFPEILEPSESFAHVNLTKTAIKDLPSSLEFLVGLQTLRLRLCSNLVSLPNGIVNLNRLSLLDFSDCCRLTGIPNNIGHLSSLTELSPQESSIVNLPESMTHLSSLKSLDLSDCKRLE* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3149 351 PANTHER LEUCINE-RICH REPEAT-CONTAINING 196 350 - -
Mtr8g3149 351 PANTHER LEUCINE-RICH REPEAT-CONTAINING 87 195 - -
Mtr8g3149 351 SUPERFAMILY L domain-like 93 348 - -
Mtr8g3149 351 PANTHER TMV RESISTANCE PROTEIN N-LIKE 196 350 - -
Mtr8g3149 351 PANTHER TMV RESISTANCE PROTEIN N-LIKE 87 195 - -
Mtr8g3149 351 Gene3D Ribonuclease Inhibitor 81 220 IPR032675 -
Mtr8g3149 351 Gene3D Ribonuclease Inhibitor 221 351 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3149 Mtr-Chr8 42033606 42035723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3149 174 349 WRKY Transcription Factor Family AT4G12020 34.091 9.70e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3149 - - mtr:MTR_8g090280 655.595