Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3137 ATGGCTCATCTTCACCCTAACCAATTTGATATTGAAGAAATTTTATTACAAGCACAATATCGATGGCTACGTCCAGCTGAAATTTGTCAAATTCTCACTAACTATAACAGCTTTCAGATTTCTTCACAACCTTCATATATGCCTCCAAGTGGTTCACTTTTCTTGTTTGATCGAAAGGCGACAAGATACTTTAGAAAGGATGGACATAACTGGAGGAAGAAAAAAGATGGAAAAACTGTCAGGGAAGCTCATGAAAGACTCAAGGCTGGAAGTGTGGAAGTATTGCACTGCTACTACGCCCATGGAGAACAAAATGATAATTTTCAAAGACGAACTTACTGGATGCTTGAGGAGGAACTCTCACACATCGTTCTAGTCCATTATCGGGAAGTGAAGAGAACCAAAGCAACTTTAATACATGCCAAAGAAAATGAAGAATCTAATCCTTGTGATCAACAATCATACAAAGTTATGCCGAACACAGAGGCAGAGACTTCTTTACCGTCTAGCATGAACAGTGGTCAAGCATCAGAATATGAAGAAGCTGAATCAGCATTCAATAGCCATGCAAATTCGGATTTCTACTCTTTTCTTGAGCTGCAACAGCCTGCTGTTCAAAAGATTAAAGCTCAACTCCCTTATTCTAACTGTCCTCTACCTCTCAAAGATGATCAGGAAAGGTTGCCTGTCATTCCTCAGGTTGATGATATCTCACTCAGTCAAACTAATGAAACCAAATACATTAACAATGTTGGATTGACATGTGAACTCTCAAAAGTTCTTGGCTTTTCATCATGGCAAGATATCTTAGAAAATAAGGCTGGAAGTCATAATGTGCCTTTTCAGTCTTTTCCTGAAAAAGAACCCAATAACATGGAAATCAATAGTACTTCTCAAGGATATGAGACAATGGGGCAACATTTAACCATCAGCATTACTAAACAGCATGAGAATAGAAGTTTTATACAAGCTGAAGCTGAAGGAAATTGGCAGGCCTCTGGCTTTAATTCATTAAGCGCATCCACATGTCCCAAAGATAGTGCCTATTCAGGCTCATCCTGTGAGGTTACTTATAGTGACAATGAGCAGGAAGTTAACGAAGTTGATTTTCAACAATCCCTGGAACAGTTCCTTCTTCATGCACACCAACAACACAAGGTTTGCATGCGAAATAGCTCTCATGAAATACCTTTAAAAGCAGAAGACCGGTTAAAATCAGATCTAGGGGTTGATAAAAGCCCAGATGGAATAGAAGACACTCAGTTCACTTCAAAGAAGACTATATTAAGTGTATCTGTGGCAGAAGATGGCCTGAAGAAGCTCGACAGTTTCAACCAATGGATGAGTAAAGAACTATGCGATGTCGAAGAATCGAGCAAGCATTCCCCTTCTGGTGCTTATTGGGATACAGTTGAAAGCGAAAATGGTGTTGACAGTACAACTATTCCTTCCCAGGTGCACCTGGAGAACTATGTACTGGATCCATCTATTTGCTATGATCAGCTTTTCAGCATCATTGATTATTCCCCAAGTTGGACATTTGAAGACTCGGAAATTGAGGTTCTCATTTCAGGACGATTCTTAAAGAGTCAACATGAAGCAGAAGATTGTAAATGGTCGTGCATGTTCGGCGAGATAGAAGTGCCGGCAGAGATAACCAGGAATGGTGTTCTCTGTTGTCATACACCACAACACAAGGCTGGAAGGGTTCCTTTCTATGTAACATGTTCTAATAGGTTAGCATGTAGTGAAGTGCGCGAATTCGATTTCCGAGTCAATTATACTCAAGAAGACAACACTGCCGGTGAGACCAGAAGCAGGAATACTTATGATACTTTTAATAAGAGATTTGGAGAATTTTTGTCCCAAGAGCATGACTTCCCTCGAGTTTTAGATTCAATTAGTGTGAATGAGAAATCTCAACTGAGAAGTAAAATTGGTTCTTTGCTTGGTAGGAAGGACGATGAATGGGATGAACTACTGAAATTTACTCTAGACAAAGATTTTTCTCCAGAACTTGTACATGATCAACTGCTTCAAAATCTTCTAAAAGATAAACTACATGCATGGCTCCTTCAGAAAACAACTGAAGATGGGAAAGGCCCAAATGTATTAGATGAAGGTGGCCAAGGTGTTCTTCATTTTGCAGCCTTTTTTGGCTACGATTGGGCCTTTGAACCAACAATTGTTGCTGGTGTGAATGTGAACTTTCGTGATGTAAATGGATGGACTGCTCTTCATTGGGCGGCGTTTTGTGGCAGGGAGAGGACAGTTGCTTCCCTCATATCTCTTGGGGGAGCACCAGGAGCACTTACTGATCCATGCCCACAACATCCTTCTGGTAGAACACCAGCCGACCTAGCTTCTGCAAATGGACACAAAGGAATTGCTGGTTATCTTGCAGAATCTTTCTTAAGCTCACAACTCAAGTCTCTTGATTTGAAAAGAAACATGAGAGAAACCGTTGGAACGAAACAAAGAGTCCAAGAACAAAACAATGAGTGCTTCTCACATGAACCTTCAATGAAAGATTCACTGGCTGCAGTGTGCAATGCAACTCAAGCTGCTGCTCGTATTCATCAAGTTTTTAGAGTGCAATCATTCCAGAGAAAACAACAAAAGGAATACGATGGTGACAAATTTGGAATATCTGATGAACGTGCTCTTTCACTAATAACAGTGAATGCAAAGTCACACAAGTCTGGACTACGCATTGAGCCTGTTCATGTTGCTGCAACACGTATTCAGAACAAGTTTCGCAGTTGGAAGGGCAGAAAAGATTTTTTGATTATTCGACAGCGAATTGTAAAAATTCAGGCTCACGTGAGAGGTCACCAGGTTAGGAAAAACTATAGGAAGATAATTTGGTCAGTTGGGATTGTGGAAAAGATTATATTACGTTGGCGTCGAAAAGGTAGTGGTTTGCGTGGATTCAAATCAGAGGCCATTTCTGAGGGAACTATGGTACAAGGTGTATCATCTGCCACTGAGGATGACTATGATTTTCTGAAAGAAGGCAGGAAGCAAACTGAGAAAAGGTTGGAGAAAGCCCTTGCTAGAGTGAAGTCAATGGCTCAATATCCAGATGCAAGAGACCAATACCACAGGCTGTTGAATGTTGTAACTGAGATACAAGAAAATCAGGTAAAGCAAGATCGAAATTTTATCAATTCAGAAGAATCAAGACAATTCAATAGCCTCGTTGATCTTGAAGCATTGTTGGATGAAGATACTTTCATGCCTACAGCCACTTAG 3255 0.4043 MAHLHPNQFDIEEILLQAQYRWLRPAEICQILTNYNSFQISSQPSYMPPSGSLFLFDRKATRYFRKDGHNWRKKKDGKTVREAHERLKAGSVEVLHCYYAHGEQNDNFQRRTYWMLEEELSHIVLVHYREVKRTKATLIHAKENEESNPCDQQSYKVMPNTEAETSLPSSMNSGQASEYEEAESAFNSHANSDFYSFLELQQPAVQKIKAQLPYSNCPLPLKDDQERLPVIPQVDDISLSQTNETKYINNVGLTCELSKVLGFSSWQDILENKAGSHNVPFQSFPEKEPNNMEINSTSQGYETMGQHLTISITKQHENRSFIQAEAEGNWQASGFNSLSASTCPKDSAYSGSSCEVTYSDNEQEVNEVDFQQSLEQFLLHAHQQHKVCMRNSSHEIPLKAEDRLKSDLGVDKSPDGIEDTQFTSKKTILSVSVAEDGLKKLDSFNQWMSKELCDVEESSKHSPSGAYWDTVESENGVDSTTIPSQVHLENYVLDPSICYDQLFSIIDYSPSWTFEDSEIEVLISGRFLKSQHEAEDCKWSCMFGEIEVPAEITRNGVLCCHTPQHKAGRVPFYVTCSNRLACSEVREFDFRVNYTQEDNTAGETRSRNTYDTFNKRFGEFLSQEHDFPRVLDSISVNEKSQLRSKIGSLLGRKDDEWDELLKFTLDKDFSPELVHDQLLQNLLKDKLHAWLLQKTTEDGKGPNVLDEGGQGVLHFAAFFGYDWAFEPTIVAGVNVNFRDVNGWTALHWAAFCGRERTVASLISLGGAPGALTDPCPQHPSGRTPADLASANGHKGIAGYLAESFLSSQLKSLDLKRNMRETVGTKQRVQEQNNECFSHEPSMKDSLAAVCNATQAAARIHQVFRVQSFQRKQQKEYDGDKFGISDERALSLITVNAKSHKSGLRIEPVHVAATRIQNKFRSWKGRKDFLIIRQRIVKIQAHVRGHQVRKNYRKIIWSVGIVEKIILRWRRKGSGLRGFKSEAISEGTMVQGVSSATEDDYDFLKEGRKQTEKRLEKALARVKSMAQYPDARDQYHRLLNVVTEIQENQVKQDRNFINSEESRQFNSLVDLEALLDEDTFMPTAT* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3137 1084 SMART iq_5 930 952 IPR000048 GO:0005515
Mtr8g3137 1084 SMART iq_5 907 929 IPR000048 GO:0005515
Mtr8g3137 1084 SMART CG_1_2 14 132 IPR005559 GO:0003677
Mtr8g3137 1084 Gene3D - 908 955 - -
Mtr8g3137 1084 ProSiteProfiles IQ motif profile. 909 937 IPR000048 GO:0005515
Mtr8g3137 1084 Gene3D - 673 820 IPR036770 -
Mtr8g3137 1084 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 7 203 - -
Mtr8g3137 1084 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 432 1081 - -
Mtr8g3137 1084 Coils Coil 1000 1020 - -
Mtr8g3137 1084 Pfam Ankyrin repeats (3 copies) 713 803 IPR002110 GO:0005515
Mtr8g3137 1084 Gene3D Immunoglobulins 498 594 IPR013783 -
Mtr8g3137 1084 ProSiteProfiles IQ motif profile. 931 955 IPR000048 GO:0005515
Mtr8g3137 1084 SUPERFAMILY E set domains 505 590 IPR014756 -
Mtr8g3137 1084 ProSiteProfiles CG-1 DNA-binding domain profile. 11 137 IPR005559 GO:0003677
Mtr8g3137 1084 SMART ANK_2a 741 770 IPR002110 GO:0005515
Mtr8g3137 1084 SMART ANK_2a 780 809 IPR002110 GO:0005515
Mtr8g3137 1084 Pfam IQ calmodulin-binding motif 933 952 IPR000048 GO:0005515
Mtr8g3137 1084 SUPERFAMILY Ankyrin repeat 697 802 IPR036770 -
Mtr8g3137 1084 Pfam CG-1 domain 18 130 IPR005559 GO:0003677
Mtr8g3137 1084 PANTHER ETHYLENE-UPREGULATED PROTEIN ER1, PUTATIVE, EXPRESSED-RELATED 432 1081 - -
Mtr8g3137 1084 PANTHER ETHYLENE-UPREGULATED PROTEIN ER1, PUTATIVE, EXPRESSED-RELATED 7 203 - -
Mtr8g3137 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 902 958 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3137 Mtr-Chr8 41939988 41947108 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3137 8 1065 CAMTA Transcription Factor Family AT5G64220 45.833 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mtr8g3137 CG-1 2.8e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3137 K21596 - gmx:100798875 1542.71