Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3136 ATGCCTACAAGTGGTTCACTTTTCCTATATAATCGAAAGGTGGTGAAACACTTTAGAAATGATGGTCATAACTGGAGGAAGAATAAAGATGGAAAAACTCTCCAGGAAAGCCATGGAAAGCTCATGGATGAAGGTGTGGAAGTATTACAGTGCTACTATGCCCGTGGAGCGCAAAATAATAATTTTTGTAGACGAATTTATTGGTTGATTGAAGAGAAACTCTCACACATTGTTTTAGTCCATTATCTGGAAGAGGAGGGAAAGAAGGCAAGTGTAATATGTTCCAAAGAATACGAAGAATCTAATCCTTGTGCTCAACAAACATACAAAGTTATGGCCAACACAGAAATGGAAACTTCTCGATCGTCTAATCTTCATCCACATAGTTACCATATTCATTTGCAAACTAACGGTGCTCAAGCATCAGAATGTGAAGAAGCTGAATTAGCATTCAATAGCGAAGCAAATTCTGATCTCCACTCTTTTCTTGAGCTGCAATGCCCTGTTTCTCAGAAGATTAAAACTCAACTCGTAGGTTCTAACTGTTCTCTACCACTCAAAGATGATCAAGAAAGGTTGCCTGTCTTTCGTCAGGTAGATTATATCCCACTCAGTCAAGCTAATGAAACCAGACACATTAATAATGTTGGATCGGCATGTGAACCGTCAAAACTCCTTGGCTATTATTCATCATGGCAACATATCTTGGACAATACTGCTGCAAGTTATGACGAGCTTTTTCAGCCTTCTTTTCCTGAGATACAATCCAATAACATGGAAATAAATAGTACTTCTCAACAATATGAGGTAATGGGGCAACCTTTTAGCAGCACCATTACTAAACAGCATCAGAATGGAAGTCTTATACAAAGTGTAGGAAATTGGCAGGTATTGGATTAG 900 0.3844 MPTSGSLFLYNRKVVKHFRNDGHNWRKNKDGKTLQESHGKLMDEGVEVLQCYYARGAQNNNFCRRIYWLIEEKLSHIVLVHYLEEEGKKASVICSKEYEESNPCAQQTYKVMANTEMETSRSSNLHPHSYHIHLQTNGAQASECEEAELAFNSEANSDLHSFLELQCPVSQKIKTQLVGSNCSLPLKDDQERLPVFRQVDYIPLSQANETRHINNVGSACEPSKLLGYYSSWQHILDNTAASYDELFQPSFPEIQSNNMEINSTSQQYEVMGQPFSSTITKQHQNGSLIQSVGNWQVLD* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3136 299 SMART CG_1_2 1 86 IPR005559 GO:0003677
Mtr8g3136 299 ProSiteProfiles CG-1 DNA-binding domain profile. 1 91 IPR005559 GO:0003677
Mtr8g3136 299 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 297 - -
Mtr8g3136 299 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 2 297 - -
Mtr8g3136 299 Pfam CG-1 domain 2 84 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3136 Mtr-Chr8 41935267 41937535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3136 2 171 CAMTA Transcription Factor Family AT5G64220 42.353 1.50e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3136 K21596 - mtr:MTR_8g090200 458.373