Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3128 ATGGACTTCTTATTTGTACTATTGCTGTTGGGTTGCCTGTGTTCATTTGTGTTACCTGATTCACAAGGAGATGCACTGATTGCATTGAAGTTATCACTGAATGCTTCAGGTCAACAGCTTAGTGACTGGAATGAAAATCAAGTCAACCCTTGTACCTGGTCGCGCGTTAACTGTGACTTTAACAACAATGTTAATCAAGTTTCACTAGCGATGATGGGATTCCCAGGACGCTTGACCCCAAGGATAGGAGCTCTAAAATATCTCGAAACTCTTTCTTTGCAAGGAAATGGCATCACTGGTGACATACCAAAAGAGTTCGGAAACCTGACAAGCTTGATCAGGTTGGATTTGGAAAACAACAGATTAACTGGTGAAATACCGTCTTCCTTTGGTAATCTTAAAAAGCTCCAATTCTTGACATTGAGTCAAAACAATCTCAGTGGAATTATTCCTGAATCACTTGCCAATATATCAAGCTTGAGCGAAATTCAGCTAGATTCAAATAATCTTAGCGGCCGGATTCCACAACATTTATTTCAAGTTCCTAAATACAATTTCAGTGGAAATACTTTGGATTGTGGTGTGAGTTATGGTCAACCTTGTGCATATAATAACAATGCAGATCAAGGTTCATCACATAAACCAACTGGCCTCATAATTGGGATTAGCATAGCATTTATAGCTATCCTTGTTATTGGTGGTCTGCTGCTATTTTGGTGCAAGGGTAGGCACAAGGGCTACAAGCGTGAAGTTTTTGTTGATGTTGCAGGTGAAGTTGATCGACGAATTGCGTTTGGTCAACTAAGAAGGTTTGCATGGAGAGAACTACAAATAGCTACCGACAATTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGCGTCCTTGCTGATAACACAAAAGTTGCTGTCAAAAGGTTAACTGATTATGAAAGCCCCGGTGGAGATGCAGCTTTCACGCGTGAAGTTGAGATGATAAGTGTAGCTGTTCACAGGAACTTGTTACGGCTGATTGGGTTTTGTACTACTCCAACTGAGCGCCTCTTGGTTTATCCCTTCATGCAGAACTTAAGTGTCGCCTATCGTCTACGAGAACTCAAAGCTGGGGAAGCTGTTTTGGATTGGCCTACGAGAAAACGAGTGGCTCTGGGAACTGCACGAGGCCTAGAATATCTTCATGAGCATTGCAATCCTAAGATTATCCATCGTGATGTGAAGGCAGCTAATGTATTACTAGACGAAGATTTTGAGGCAGTTGTCGGCGACTTTGGTTTGGCAAAGTTAGTTGACATTCGAAAGACTAATGTGACAACTCAAGTTCGCGGGACAATGGGTCACATAGCTCCTGAATATCTGTCGACCGGAAAATCTTCAGAAAGGACTGATGTTTTTGGTTACGGGATTATGCTTCTGGAGCTTGTTACAGGTCAACGTGCAATTGACTTTTCACGTTTGGAAGAGGAAGATGATGTGCTGTTGCTTGACCATGTTAAGAAATTAGAACGAGAGAAAAGACTCGAAGCTATTGTTGATCGCAACCTAAATAAAAATTACAACATGCATGAGGTAGAAATGATGATAAAAGTTGCATTACTGTGCACTCAAGCAACGTCGGAGGACCGTCCCCTGATGTCTGAGGTTGTAAGAATGCTAGAAGGAGAAGGGTTGGCCGAAAGGTGGGAGGAATGGCAGCATGTGGAGGTGAATCGAAGGCAAGAATACGATAGATTACAAAGAAGATTTGATTGGGGAGAAGATTCAGTTTATAATCAAGACGCCATTGAGTTATCTGGTGGGAGGTGA 1821 0.419 MDFLFVLLLLGCLCSFVLPDSQGDALIALKLSLNASGQQLSDWNENQVNPCTWSRVNCDFNNNVNQVSLAMMGFPGRLTPRIGALKYLETLSLQGNGITGDIPKEFGNLTSLIRLDLENNRLTGEIPSSFGNLKKLQFLTLSQNNLSGIIPESLANISSLSEIQLDSNNLSGRIPQHLFQVPKYNFSGNTLDCGVSYGQPCAYNNNADQGSSHKPTGLIIGISIAFIAILVIGGLLLFWCKGRHKGYKREVFVDVAGEVDRRIAFGQLRRFAWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDAAFTREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKAGEAVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDIRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLEAIVDRNLNKNYNMHEVEMMIKVALLCTQATSEDRPLMSEVVRMLEGEGLAERWEEWQHVEVNRRQEYDRLQRRFDWGEDSVYNQDAIELSGGR* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3128 606 Gene3D Transferase(Phosphotransferase) domain 1 360 577 - -
Mtr8g3128 606 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 606 - -
Mtr8g3128 606 Pfam Leucine rich repeat 88 144 IPR001611 GO:0005515
Mtr8g3128 606 Pfam Leucine rich repeat N-terminal domain 19 59 IPR013210 -
Mtr8g3128 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Mtr8g3128 606 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 606 - -
Mtr8g3128 606 SUPERFAMILY L domain-like 22 190 - -
Mtr8g3128 606 SUPERFAMILY Protein kinase-like (PK-like) 263 558 IPR011009 -
Mtr8g3128 606 Gene3D Phosphorylase Kinase; domain 1 252 359 - -
Mtr8g3128 606 Pfam Protein kinase domain 284 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3128 606 Gene3D Ribonuclease Inhibitor 19 203 IPR032675 -
Mtr8g3128 606 SMART LRR_typ_2 157 181 IPR003591 -
Mtr8g3128 606 SMART LRR_typ_2 133 156 IPR003591 -
Mtr8g3128 606 SMART LRR_typ_2 109 132 IPR003591 -
Mtr8g3128 606 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Mtr8g3128 606 SMART serkin_6 283 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3128 606 ProSiteProfiles Protein kinase domain profile. 283 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3128 Mtr-Chr8 41870298 41878323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3128 1 606 Receptor kinase-like Gene Family AT5G10290 76.238 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mtr8g3128 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3128 - - gmx:100793416 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3128 8 41870298 41878323 Mtr8g3128 8 41870298 41878323 ECH