Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3104 ATGCAACATTTCTTCCTATCCCATTATTTTTTCAATCCTTCTATGGGAAGAATCAAAGTTTCCACCCTTTTCTCTGCTAATAATGGCCATCACTACACTCTTCCTCTTGTAAACAAACCCAATACACACAAAGATCATTTCCCTTCTTCAGTCTTAAAATGTTTTCGACGATTTATCTGTGGAAGGAAAGTTGATGGAGGATCAAGAACAAAGGAAGAAGAGAAAGTGTACTCTTGGTTATATACACTGGCTCAGTCTGAAAAAAACTTGGTCTTTGAGTATGTTAGATCCACTGAAAGAGGCTTAAGTTTTACTGAAGCTGAGAGGAGGCTGCGGGAAAATGGTCCAAATGTTCCACTTGAGTATTCATTTCCAAGCTTGTGGAATCTTCTATGGAATGCTCTTTTCCATCCTTTCAATATGATTCTGATTATTTTATCTTCTCTGTCCTTCATCGCCCGTGATTATCCCAACGGATTCATCATGCTCATATTGGTTTTTATCAGTGTCATCCTTCGATTCTGTCTGGAACACAGAAGCTCAAAAGCCGCGATGAAACTTTCAGAATTTTTAAGGTGTCCTATAAAAGTTCAAAGATGTGCTGGTAGAATTGAACAGAAAGAATTGATAGTTCAAGTTGATCACATGGATGTAGTTCCAGGTGATATTGTGATTTTTGAACCTGGCGACCTCTTTCCTGGAGATATCAGGCTGTTATCTTCAAAACACCTTGTTGTAAGCCAGGCCTCACTAACTGGGGAATCTTGGACAACCGACAAAGCTGGCGATGTTAGAGAAGATCACAACACTCCTTTACTAGATTTAAAGAACATTTGCTTTATGGGCACAAATGTGGTATCAGGTACGGGAACAGGTTTAGTTATTTCAACTGGATCAAATACTTACATGAGCACCATGTTTTCAAAAATTGGGAAGAAAAAACCGCCAGACGACTTTGAAAAGTGTCTCAGATGGATATTTTACATGCTTATTTCCGTTATGCTAGTAGTTGTTACAATTATGTTCGTGACAGATTTCACTACATCTCATAATTTGAGCAAGAGTGTTCTCTTTGCCATCTCAGTTTCATCTGCACTCAATCCTCAAATGCTTCCCCTCATCATTAACACATGCCTCGCGAAAGGAGCAGTTGCTATGGCTAAAGACAGATGTATTGTAAAAAGTCTAACATCTATACGTGAGATGGGATCAATGGATATTCTTTGTATTGACAAGACAGGCACCCTTACAATGAATCATGCAATCTTGGTTAATCATCTTGACTGCAGGGGTTTACCCCGAGAAAAAGTTCTACGCTATGCGTTCCTCAATTCTTACTTCAAGGCTGAGCAAAAGTATCCTCTGGATGATGCAATTCTAGCACATGTATATTCAAATGGATTCAAGTTTCAGCCATCCAAGTGGAAGAAGATAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATGTTAGAAACAGACGATAGACACTCGAGGTTCTTTGGCAGGTTCATGGTAACAAAAGGAGCATTGTTGGAAGTCATAAAAGTTTGTTCTTTTATTGAGAATTTTGATAAAGATGAAATTTCTACCTTCTCATCAAATGACTATCAGAGGATTTTAAATCTAACAGAAGAATTGAGCAATGAAGGGTTAAGGGTTATCGCAGTAGCTATAAAGAAGGTCGAAATGCAGCAGACTTGCGAAACAAGTAACGGAAGCAAGAGACACGACTATGATTTCGAAAGAGACATGATATTTCTTGGTTTCATAACATTTTTTGATCCACCTAAGGACTCAGCAAAGGAAGCACTGTGGTGTTTGGCTGAGAAAGGAGTGAAAGCCAAAGTTTTAACAGGCGACTCACTTTCCTTAACCACAAGAATATGCAGAGAAGTCGGCATAAGTACCACTCATGTTATAACAGGACCTGAGCTAGAAGAACTTGATCAAGAAACATTCCATGAAACCGTTAAAAGAGCAACGGTGCTAGCCCGTCTCACCCCTAGTCAAAAACTTCGAGTCGTGCAATCATTGCAGACAAAAGGAAACCATGTTGTTGGTTTCTTAGGAGACGGTGTGAATGATTCACTAGCTTTGGATGCTGCTCATGTAAGCATTTCAGTGGACTCCGGCGTAGCCATTGCCAAAGACATGGCAGACATAATCTTACTAGAGAAAGATCTAAACGTGCTCGTTGCGGGCGTGGAGCACGGTCGTCTCACCTTTGGCAACACAATGAAGTACTTAAAGATGTCGGTTATTGCTAACTTGGGAAGTATCATTTCACTCCTCATAGCAACATTGTTCCTAAAATATGAGCCCTTGACTTCTAGACAGCTACTTACACAGAATTTCATCTATAGCCTTGGACAAATCGTCATCCCTTGGGACAAAATGGATGAAGAATATTTGAACACTCCTCATAAGTGGTCCGTGCGAGGCTTGCCGATGTTCATATTGTGGAATGGACCGGTATGCATTTTATGTGACGTGGCAACACTTTTGTTTCTTTGGTTTTATTGCAAGGCTTATGATGATATGAAATTTTTTCATTCAGCTTGGTTCATTGAGGGTCTTCTGATGCAAACTCTGATTGTTCATTTGATGAGGACTGAGAAAATCCCTTTCATTCAGGATATTGCTTCTTGGCCTGTGATTTTTTCCACTCTTGTGATATCTACAATTGGAATTGCAATTCCATTCACTCCTATTGGGAGGGTTATGGGATTCACCCTTATACCTCTTTCATATTTTGGATTTTTGTTTGTTATTTTTATGGGATATTTTACAATAGGTCAGGTGGTTAAGAGACTTTACATACTGGTTTATAAGAGATGGCTTTGA 2856 0.3929 MQHFFLSHYFFNPSMGRIKVSTLFSANNGHHYTLPLVNKPNTHKDHFPSSVLKCFRRFICGRKVDGGSRTKEEEKVYSWLYTLAQSEKNLVFEYVRSTERGLSFTEAERRLRENGPNVPLEYSFPSLWNLLWNALFHPFNMILIILSSLSFIARDYPNGFIMLILVFISVILRFCLEHRSSKAAMKLSEFLRCPIKVQRCAGRIEQKELIVQVDHMDVVPGDIVIFEPGDLFPGDIRLLSSKHLVVSQASLTGESWTTDKAGDVREDHNTPLLDLKNICFMGTNVVSGTGTGLVISTGSNTYMSTMFSKIGKKKPPDDFEKCLRWIFYMLISVMLVVVTIMFVTDFTTSHNLSKSVLFAISVSSALNPQMLPLIINTCLAKGAVAMAKDRCIVKSLTSIREMGSMDILCIDKTGTLTMNHAILVNHLDCRGLPREKVLRYAFLNSYFKAEQKYPLDDAILAHVYSNGFKFQPSKWKKIDEIPFDFIRRRVSVMLETDDRHSRFFGRFMVTKGALLEVIKVCSFIENFDKDEISTFSSNDYQRILNLTEELSNEGLRVIAVAIKKVEMQQTCETSNGSKRHDYDFERDMIFLGFITFFDPPKDSAKEALWCLAEKGVKAKVLTGDSLSLTTRICREVGISTTHVITGPELEELDQETFHETVKRATVLARLTPSQKLRVVQSLQTKGNHVVGFLGDGVNDSLALDAAHVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYLKMSVIANLGSIISLLIATLFLKYEPLTSRQLLTQNFIYSLGQIVIPWDKMDEEYLNTPHKWSVRGLPMFILWNGPVCILCDVATLLFLWFYCKAYDDMKFFHSAWFIEGLLMQTLIVHLMRTEKIPFIQDIASWPVIFSTLVISTIGIAIPFTPIGRVMGFTLIPLSYFGFLFVIFMGYFTIGQVVKRLYILVYKRWL* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3104 951 Pfam haloacid dehalogenase-like hydrolase 405 706 - -
Mtr8g3104 951 Pfam Cation transporter/ATPase, N-terminus 93 150 IPR004014 -
Mtr8g3104 951 SUPERFAMILY Calcium ATPase, transduction domain A 208 308 IPR008250 -
Mtr8g3104 951 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 61 950 - -
Mtr8g3104 951 SFLD p-type atpase 391 743 IPR044492 -
Mtr8g3104 951 PRINTS Magnesium-transporting ATPase signature 322 338 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 PRINTS Magnesium-transporting ATPase signature 443 456 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 PRINTS Magnesium-transporting ATPase signature 751 766 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 PRINTS Magnesium-transporting ATPase signature 769 780 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 PRINTS Magnesium-transporting ATPase signature 801 814 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 PRINTS Magnesium-transporting ATPase signature 821 837 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 PRINTS Magnesium-transporting ATPase signature 854 875 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 PRINTS Magnesium-transporting ATPase signature 904 925 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 72 950 IPR006415 GO:0015444|GO:0015693|GO:0016021
Mtr8g3104 951 SUPERFAMILY Calcium ATPase, transmembrane domain M 97 948 IPR023298 -
Mtr8g3104 951 Gene3D - 406 730 IPR023214 -
Mtr8g3104 951 Pfam E1-E2 ATPase 210 388 - -
Mtr8g3104 951 SFLD C1.7: P-type atpase like 391 743 - -
Mtr8g3104 951 Gene3D - 156 902 - -
Mtr8g3104 951 SUPERFAMILY HAD-like 584 741 IPR036412 -
Mtr8g3104 951 Gene3D - 193 297 - -
Mtr8g3104 951 Gene3D - 421 597 IPR023299 GO:0000166
Mtr8g3104 951 SMART Cation_ATPase_N_a_2 82 155 IPR004014 -
Mtr8g3104 951 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 402 600 IPR023299 GO:0000166
Mtr8g3104 951 PANTHER CATION TRANSPORTING ATPASE 61 950 - -
Mtr8g3104 951 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 162 452 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g3104 951 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 655 773 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g3104 951 ProSitePatterns E1-E2 ATPases phosphorylation site. 411 417 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3104 Mtr-Chr8 41601500 41606259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3104 100 813 Primary Pumps ATPases(2) AT1G10130 27.173 4.01e-66 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3104 K01531 - gmx:100795153 1566.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3104 8 41601500 41606259 Mtr8g3104 8 41601500 41606259 ECH