Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3093 ATGGGTGTCTTCACATTCGTCCTCAACAAAACCGGCGCCGAATGGACCGCAAAGCAATACTCAGGCGACATCGAAGCCTCCGCTGAATCTACCTTCGAGATCCAACGGAAACTTGTTCAAGCTGCTCTCGCTGTTGATTCCAACGGTGGTGTTCAGTCCTCTTACTCTCCCATCTCTCCTTCCTCTGGTGTCTTCCAGGTGGTTGTAGGTGGTGCAGTTTTTGTTGGAGGTGGTGCTGCAGCTGCTGCTCCCGCAGGAGGTGCTGCACCAGCTGATGATGCCCCTGCTGCCGCAAAGAAAGAAGAAAAGGTCGAGGAAGAGGAGGAAGATGATGATATGGGATTCTCACTCTTTGATTAG 360 0.5222 MGVFTFVLNKTGAEWTAKQYSGDIEASAESTFEIQRKLVQAALAVDSNGGVQSSYSPISPSSGVFQVVVGGAVFVGGGAAAAAPAGGAAPADDAPAAAKKEEKVEEEEEDDDMGFSLFD* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3093 119 Pfam 60s Acidic ribosomal protein 72 118 - -
Mtr8g3093 119 MobiDBLite consensus disorder prediction 104 119 - -
Mtr8g3093 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 IPR044252 GO:0003735|GO:0005840
Mtr8g3093 119 MobiDBLite consensus disorder prediction 81 119 - -
Mtr8g3093 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3093 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 64.706 1.50e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3093 K02942 - gmx:100804776 109.768