Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3092 ATGTCGAAACCCTGGGGCAATATCGGAGCTTGGGCGGCCGATTCGGAGGCAGCCGAAGCCGAGGAACGCGAAGCGGCAGCTAAGTCAGCGGCCGCTCCGTCAGACAACTTCCCTAGTCTCAAGGAAGCCGTGACTACCAAACCGAAGAAGAATAAGAAGATGTCGCTTTCTGAATTCACACGTGGAGGTTACTCCTCCGGTGGTGGCGCCGCTGATATCCCTCGTTTGACACCGGAGGAGATGCTTCGTCTTCCTACCGGTCCTAAGGAACGTTCTGCTGAGGAAATGCAGTTTAACCGTCTTGGCGGCGGTTTCTCTTCCTATGGCGGTGGTCGTGGTAGGGATCGCGAGGGAGCCTCTGGTGATGGCTCTTGGGGCGCTGGAAGAAGATCTTATGGTGGATTTGATGATGAACGTAGAGCGCCGAGTTCTAGGGTTTCGGAATTTGAACCGTCGAGGGCTGATGAGGTGGATAATTGGGCGTCGGTGAAGAAGTCGCTTCCGTCGTTTGATTCCGGTCGTCAGAATCAGAATCAGAATCGATATGGTGGCAGTGGTGGTGGTGGTGGTGGTTTTGGTGGTGGTGAATCTAAGGCGGATGGAGTGGATAATTGGGCGGTTGGTAAGAAACCTCTTCCTGTTAGATCTTATGGCGGTTCTCGTGATTCTGGAATGGAACCAGATCGCTGGTCTAGAGGTTCTGCTGTGGAACCAGATCGTTGGGCTAGAGGAGCGCCGCGGCGTGATTCGGAGCAACAGCAGCGTCCGAGGTTGGTTTTGGATCCAAGGAAAGGTGATAGTTCTGTCAATGAATCTCCGGTGGTGAAGACGAATAAGCCTAATCCATTTGGTGCGGCGAGGCCTAGGGAGGAAGTGTTGGCGGAGAAAGGATATGATTGGAAGAAGCTGGATTCTGAGATTGAGGCGAAAAAGACGAGTAGGCCTACAAGTTCACATTCCAGCAGGCCTTCAAGTGCTCAATCCAATCGCTCCGAGGGTCAAGATGGTGCGCTGAAACCGAGGCCAAAGGTGAATCCTTTTGGAGATGCCAAACCTAGGGAGGTTTTGCTCAGCGAGCGTGGTAAGGATTGGCGGAAGATGGATCTTGAATTGGAGCATCGCGCCGTTGATAGGCCCGAGACCATAGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGCAACTTGAGAATGAGTCTACAGTTAATTCAAATGAGGAATCTGCAGATGGTTCTGGTGGAGACCAAACTGGTACACATGCAATGCTACTAGAGAAAGAAAGGGAGCTGGAACTACTTATCCGTGATTTAGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCTGGTTCGTCAGCAGGGAAGACTGCTGGTTTTTCTGATAGGCCACCATCTCGGTCTGGCTCATTTGAGGATTCAAGAAGTGTGGATTTTACGGACCGACCTCGATCCCGTGGCACAGGTGATACGTCGATGCGCCCTACTGATGACAGAAGACAATTTCAAGGTAGCAAGGATAGGGGGTGGTTTTCGGACAGCAGAGACTTGAATAGGTCAAATTCCAAAAATAGATGGTGA 1590 0.5063 MSKPWGNIGAWAADSEAAEAEEREAAAKSAAAPSDNFPSLKEAVTTKPKKNKKMSLSEFTRGGYSSGGGAADIPRLTPEEMLRLPTGPKERSAEEMQFNRLGGGFSSYGGGRGRDREGASGDGSWGAGRRSYGGFDDERRAPSSRVSEFEPSRADEVDNWASVKKSLPSFDSGRQNQNQNRYGGSGGGGGGFGGGESKADGVDNWAVGKKPLPVRSYGGSRDSGMEPDRWSRGSAVEPDRWARGAPRRDSEQQQRPRLVLDPRKGDSSVNESPVVKTNKPNPFGAARPREEVLAEKGYDWKKLDSEIEAKKTSRPTSSHSSRPSSAQSNRSEGQDGALKPRPKVNPFGDAKPREVLLSERGKDWRKMDLELEHRAVDRPETIEEKLLKEEIDNLKKQLENESTVNSNEESADGSGGDQTGTHAMLLEKERELELLIRDLDDKVRFGQKAVERPGSSAGKTAGFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDTSMRPTDDRRQFQGSKDRGWFSDSRDLNRSNSKNRW* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3092 529 MobiDBLite consensus disorder prediction 132 160 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 477 529 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 165 184 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 316 334 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 289 315 - -
Mtr8g3092 529 Pfam Plant specific eukaryotic initiation factor 4B 1 512 IPR010433 GO:0003743
Mtr8g3092 529 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 529 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 398 417 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 393 426 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 447 529 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 1 361 - -
Mtr8g3092 529 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 529 IPR010433 GO:0003743
Mtr8g3092 529 Coils Coil 384 411 - -
Mtr8g3092 529 MobiDBLite consensus disorder prediction 225 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3092 Mtr-Chr8 41494052 41501616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3092 1 529 Eukaryotic Initiation Factors Gene Family AT3G26400 54.174 3.16e-151 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3092 - - gmx:100784238 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3092 8 41494052 41501616 Mtr8g3092 8 41494052 41501616 ECH