Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3061 ATGTTAGAAACTGGTGCACGTGATTCTGAGTTGAGTTTAGAAACTGTGAATTCAACACAGCGAAGCTCAATGAGCAGTGAAAGCATTTGCAGCACTAGTTTCAGCCGTCTTTCATTCGACCTTCTTCCTCCTTCACCGGAGAGTCTCTCCCTCAAACCTCACCGCTCCTCCGACTTCGCTTACTCCGCCATCCGTCGCAAGTCCGCTCTCACATTTCGTGACTTCCACCTCCTCCGCCGTATCGGCGCCGGAGATATCGGTACTGTTTACCTATGCCGCCTGAGAAACGGAAATGACAAATTCAAAAACGAAGAAGATAACACTTGTTTGTATGCGATGAAGGTTGTGGATAAAGACGTTGTTGCATTAAAGAAGAAATCACATAGAGCTGAAATGGAGAGAAAGATTCTGAAAATGCTTGATCATCCTTTTCTTCCTACACTCTACGCTGAGTTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAGTTTTGTTCCGGTGGTGACTTGCATTCCATACGCCACAAACACCCTCACAACCGTCTTCCTCTTATTTCCGCTAGATTTTATGCAGCTCAAGTATTGGTGGCGTTGGAGTACCTTCACATGCTGGGAATCATTTACAGAGATCTAAAGCCTGAGAATGTGTTAGTTCGATCAGACGGTCACATTATGCTTTCAGATTTCGATCTTTCACTTTGCTCAAATGCAATCCCAGCTGTTGAATCATCAGATAATTTACAAGATTCTTCCACTTTTTCATCAACATTACCCTACACTCGTTCCCGTTCTTTTCCTACACCATTCACTTGCTTTTCTAACCGGTTGTTTAAATCACGTAAGGTTCAAACTGTTCAACCGAACCGGCTTTTTGTAGCTGAACCGGTGTCTGCTCGGTCTTGTTCATTTGTTGGAACACATGAATATGTCTCGCCGGAAGTTGCCGCCGGAAACTCCCACGGCAACGCCGTGGATTGGTGGTCGTTTGGGATATTCATCTATGAACTCGTTTACGGGCGTACTCCGTTTGCGGCTCCATCGAATAAGGAAACACTGCGTAACATCTTAAAAAAGCCTCTTACTTTTCCAACACCTACGGCCTCAAGCGCGCTTGAACTTCACGCGCGGGATTTGATTTCCGGGTTGCTTAATAAGGATCCGACTCAACGACTCGGGTCGAAACGTGGGTCAGCTGACGTCAAGCAGCATTCGTTTTTTAAAGGGATTAATTTGGCGCTGATTCGTATGTTAACGCCGCCTGAAGTTCCTCCTGGCTCAAGAAAGCCTAAAACGATGTCGTTGTATCGTGGGAAGGGTAGTAATAGTAGTAGTAGAGGGCAACAAACGTCGTCGTTTGATATTTACTTTTGA 1371 0.4522 MLETGARDSELSLETVNSTQRSSMSSESICSTSFSRLSFDLLPPSPESLSLKPHRSSDFAYSAIRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRNGNDKFKNEEDNTCLYAMKVVDKDVVALKKKSHRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSIRHKHPHNRLPLISARFYAAQVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSNAIPAVESSDNLQDSSTFSSTLPYTRSRSFPTPFTCFSNRLFKSRKVQTVQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELVYGRTPFAAPSNKETLRNILKKPLTFPTPTASSALELHARDLISGLLNKDPTQRLGSKRGSADVKQHSFFKGINLALIRMLTPPEVPPGSRKPKTMSLYRGKGSNSSSRGQQTSSFDIYF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3061 456 PANTHER FLIPPASE KINASE 1-RELATED 1 456 - -
Mtr8g3061 456 SMART serkin_6 75 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3061 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mtr8g3061 456 Gene3D Transferase(Phosphotransferase) domain 1 169 424 - -
Mtr8g3061 456 MobiDBLite consensus disorder prediction 420 456 - -
Mtr8g3061 456 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g3061 456 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 456 - -
Mtr8g3061 456 SUPERFAMILY Protein kinase-like (PK-like) 54 424 IPR011009 -
Mtr8g3061 456 Pfam Protein kinase domain 300 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3061 456 Pfam Protein kinase domain 75 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3061 456 ProSiteProfiles Protein kinase domain profile. 75 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3061 456 MobiDBLite consensus disorder prediction 435 456 - -
Mtr8g3061 456 Gene3D Phosphorylase Kinase; domain 1 75 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3061 Mtr-Chr8 41248541 41250392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3061 8 441 AGC Kinase Gene Family AT2G34650 66.516 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr8g3061 Pkinase 3.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3061 - - gmx:100815648 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3061 8 41248541 41250392 Mtr8g3061 8 41248541 41250392 ECH