Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3049 ATGCAAACAAAGCAAACCAAAGAAGCAAACATGGCTTTGTTCTCTCATTTACTTCTTCATTTTGCCTTATTAATGATCTTTATCCATTTCAACAACCTTTTAGTTGGTGTATCATCAACCACTCTAAGCATTACCACAGACAAAGAAGCCTTAATCTTATTAAAATCTCAGTTAAGCAATAATAACACTTCTCCTCCCCCATTATCCTCTTGGATCCATAATTCATCTCCTTGCAATTGGACTGGTGTCCTATGTGACAAGCATAACCAAAGAGTGACTAGCTTGGACCTTTCAGGCTTCGGACTCTCAGGTAACTTAAGCCCTTATATAGGTAACATGTCCTCTCTTCAGTCCCTTCAATTGCAGGATAACCAGTTCACAGGATTCATTCCTGAGCAAATTACCAATCTCTATAATTTGAGAGTTCTAAATATGAGTTCCAACAGATTTGAAGGAATCATGTTTCCTTCAAATCTTACCAATTTAGATGAGCTTCAAATTCTTGATTTGTCATCAAACAAGATTGTAAGCAGAATTCCTGAACACATCAGCAGCTTGAAAATGCTGCAGGTCTTAAAACTTGGAAAGAATAGCTTCTATGGTACAATTCCACAATCTCTAGGAAATATTTCTACTCTAAAAAATATTAGTTTTGGCACAAACTCTCTTAGTGGCTGGATTCCTAGTGACTTAGGTAGGTTACATAATTTAATTGAGCTTGATCTCACTCTTAATAATCTTACTGGAACTGTTCCACCTGTTATATATAATTTGTCTTCCCTTGTTAACTTGGCCTTAGCTGCAAATTCCTTCTGGGGTGAGATTCCTTATGATGTTGGTCATTTACTTCCAAAACTACTAGTTTTCAATTTTTGTTTCAATAAGTTCACAGGTAGGATTCCAGGGTCTTTACATAACCTAACAAACATTAGGGTTATTCGTATGGCCTCTAACCATTTGGAAGGAATAGTTCCACCTGGTTTAGGAAATCTCCCATTTCTTCACATGTATAATATTGGCTATAACAGGATAGTCACCACAGGAGTCAATGGTCTGGATTTCATTACTTCATTGACAAACAGTACTCACTTGAACTTTCTCGCAATTGATGGAAACATGCTCAAAGGTGTTATTCCTGAAACCATTGGAAATCTCTCCAAGGAACTCTCAATATTATACATGGGAGAGAATCGTTTCAATGGAAGTATACCTTCGTCTATTTCTCGTCTTAGTGGCTTGAAGTTGTTAAACTTGAGCTACAATTCAATTAGTGGAGATATTCCAAAGGAGTTAGGTCAGTTAGACGAACTACAAGGGCTGTATCTGGATGGAAATAAGATATCAGGAGATATTCCAAACTCTCTTGGTAATCTTATAAAGTTAAACAAGATTGATTTGTCAAGAAATGAACTTGTAGGTAGAATACCAGTTAGTTTTGGTAATTTTCAAAACCTGCTCTACATGGACTTATCTAGCAATAAGCTCAATGGAAGCATACCTGTGGAAATCCTCAATATACCAACTTTGAGCAATGTATTAAACTTATCAAAGAACTTGTTGAGTGGACCAATACCTGAAGTTGGGCAATTGACAACCATTTCCACCATTGACTTTTCCAACAACCAATTGTATGGAAACATCCCCAGCTCATTCAGCAACTGTTTGAGCTTGGAGAAAATGTTTTTGTCCCAGAATATGCTTTCAGGTTACATTCCAAAAGCTCTTGGAGATGTGAAAGGCTTGGAAACTTTGGACTTGTCCTCCAACCTACTCTCAGGACCCATTCCTATTGAGCTTCAAAATTTGCATGTCCTTCAACTTTTAAACATCTCTTACAATGATTTAGAAGGAGAGATTCCTAGTGGTGGAGTTTTTCAAAATGTCTCTAATGTCCACTTAGAAGGCAACAAAAAACTATGCTTGCATTTTGCATGTGTGCCTCAAGTTCATAAAAGATCAAGTGTTAGATTTTATATCATCATAGCTATTGTGGTAACATTGGTACTATGTCTCACAATTGGTTTGCTACTATACATGAAGTATACAAAGGTGAAGGTGACAGAAACATCAACATTTGGACAGCTAAAGCCACAGGCTCCAACGGTCTCTTACGATGAGCTTCGCTTGGCAACTGAAGAGTTCAGCCAAGAAAATTTAATAGGAATTGGGAGTTTTGGAAAAGTGTATAAAGGCCATTTACGTCAGGGAAATAGTACTGTTGCAGTGAAAGTGCTTGATACTTCAAGAACAGGTTTTTTAAAGAGTTTCTTTGCAGAGTGTGAGGCTATGAAGAATTCAAGGCATAGAAATCTGGTTAAGCTAATCACATCATGCTCTAGTGTTGATTTTAGAAACAATGATTTTCTGGCTTTGGTGTATGAGTATTTAAGTAAAGGGAGCTTGGAAGATTGGATTAAAGGGAGGAGAAATCATGCAAATGGAAATGGTTTGAATCTTATGGAGAGACTGAATATAGTTATTGATGTTGCTCTTGCATTAGATTACCTGCACAATGATAGTGAAACTCCTATTGTGCACTGTGATCTAAAGCCAAGTAATATTCTCCTGGATGAAGATATGACTGCAAAGGTTGGAGACTTTGGTTTGGCTAGGTTGCTGATTCAAAAATCAACTAGTCAAGTTTCCATCAGCTCTACTCATGTTCTTAGAGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCTTCAGCAGCAGGGGATGTATATAGTTTTGGGATAGTGTTGCTTGAACTTTTCTGTGGGAAAAGTCCACAAGATGATTGCTTCACTGGAGGCCAGGGCATAACAAAGTGGGTACAATCAGCATTCAAAAACAAGACTGCACAAGTCATTGACCCTCAGCTGCTATCTCTCATTTTTCATGATGATTCTGCTAGAGACTCTGATTTACAACTTCGTTGTGTGGATGCAATTATGGGAGTTGGACTGTCCTGCACTGCTGACAATCCAGATGAACGAATTGGCATAAGAGTTGCGGTTCGCCAACTAATAGCTGCTAGCCAACTAAAATCTTCTAGGGACTCTTCTGAAAAAATCTGA 3072 0.3783 MQTKQTKEANMALFSHLLLHFALLMIFIHFNNLLVGVSSTTLSITTDKEALILLKSQLSNNNTSPPPLSSWIHNSSPCNWTGVLCDKHNQRVTSLDLSGFGLSGNLSPYIGNMSSLQSLQLQDNQFTGFIPEQITNLYNLRVLNMSSNRFEGIMFPSNLTNLDELQILDLSSNKIVSRIPEHISSLKMLQVLKLGKNSFYGTIPQSLGNISTLKNISFGTNSLSGWIPSDLGRLHNLIELDLTLNNLTGTVPPVIYNLSSLVNLALAANSFWGEIPYDVGHLLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMASNHLEGIVPPGLGNLPFLHMYNIGYNRIVTTGVNGLDFITSLTNSTHLNFLAIDGNMLKGVIPETIGNLSKELSILYMGENRFNGSIPSSISRLSGLKLLNLSYNSISGDIPKELGQLDELQGLYLDGNKISGDIPNSLGNLIKLNKIDLSRNELVGRIPVSFGNFQNLLYMDLSSNKLNGSIPVEILNIPTLSNVLNLSKNLLSGPIPEVGQLTTISTIDFSNNQLYGNIPSSFSNCLSLEKMFLSQNMLSGYIPKALGDVKGLETLDLSSNLLSGPIPIELQNLHVLQLLNISYNDLEGEIPSGGVFQNVSNVHLEGNKKLCLHFACVPQVHKRSSVRFYIIIAIVVTLVLCLTIGLLLYMKYTKVKVTETSTFGQLKPQAPTVSYDELRLATEEFSQENLIGIGSFGKVYKGHLRQGNSTVAVKVLDTSRTGFLKSFFAECEAMKNSRHRNLVKLITSCSSVDFRNNDFLALVYEYLSKGSLEDWIKGRRNHANGNGLNLMERLNIVIDVALALDYLHNDSETPIVHCDLKPSNILLDEDMTAKVGDFGLARLLIQKSTSQVSISSTHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGIVLLELFCGKSPQDDCFTGGQGITKWVQSAFKNKTAQVIDPQLLSLIFHDDSARDSDLQLRCVDAIMGVGLSCTADNPDERIGIRVAVRQLIAASQLKSSRDSSEKI* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3049 1023 SUPERFAMILY L domain-like 47 344 - -
Mtr8g3049 1023 ProSiteProfiles Protein kinase domain profile. 714 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3049 1023 Gene3D Phosphorylase Kinase; domain 1 677 795 - -
Mtr8g3049 1023 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Mtr8g3049 1023 Pfam Leucine rich repeat 388 447 IPR001611 GO:0005515
Mtr8g3049 1023 Pfam Leucine rich repeat 534 591 IPR001611 GO:0005515
Mtr8g3049 1023 Gene3D Transferase(Phosphotransferase) domain 1 796 1022 - -
Mtr8g3049 1023 SMART LRR_typ_2 307 331 IPR003591 -
Mtr8g3049 1023 SMART LRR_typ_2 234 258 IPR003591 -
Mtr8g3049 1023 SMART LRR_typ_2 113 136 IPR003591 -
Mtr8g3049 1023 SMART LRR_typ_2 162 186 IPR003591 -
Mtr8g3049 1023 SMART LRR_typ_2 602 627 IPR003591 -
Mtr8g3049 1023 SMART LRR_typ_2 458 481 IPR003591 -
Mtr8g3049 1023 SMART LRR_typ_2 137 157 IPR003591 -
Mtr8g3049 1023 SMART LRR_typ_2 410 434 IPR003591 -
Mtr8g3049 1023 Pfam Leucine rich repeat N-terminal domain 46 86 IPR013210 -
Mtr8g3049 1023 SUPERFAMILY Protein kinase-like (PK-like) 691 1007 IPR011009 -
Mtr8g3049 1023 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Mtr8g3049 1023 SMART serkin_6 714 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3049 1023 Gene3D Ribonuclease Inhibitor 211 349 IPR032675 -
Mtr8g3049 1023 Pfam Protein kinase domain 715 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3049 1023 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 33 1006 - -
Mtr8g3049 1023 Gene3D Ribonuclease Inhibitor 350 648 IPR032675 -
Mtr8g3049 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Mtr8g3049 1023 PANTHER OS04G0122200 PROTEIN 33 1006 - -
Mtr8g3049 1023 Gene3D Ribonuclease Inhibitor 46 154 IPR032675 -
Mtr8g3049 1023 Gene3D Ribonuclease Inhibitor 155 210 IPR032675 -
Mtr8g3049 1023 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Mtr8g3049 1023 SUPERFAMILY RNI-like 251 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3049 Mtr-Chr8 41137247 41141151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3049 46 1019 Receptor kinase-like Gene Family AT3G47570 41.466 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g3049 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3049 - - gmx:100783512 1551.57