Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g3048 | ATGGATACATTCTTGCAATCCTTGTTACTAATTTTGATTCCTTTAATAGCATTTTTCTGTTTTTTCCTCAAAACAAAACAAATTGGCACAAAAAACATGCCACCAGGTGCTTTTGGTTGGCCATTAGTAGGTGAAACATACCAACTTTTGTTCAAAAACATTGAAAATTTCATTCAAGAGAGAGCAGAAAAACACTCCTCAGAGATTTTCAAAACAAATTTATTTGGAGAACCAACTGTGGTTATGTTTGGTCCTGCTGCAAATAAATTCCTTTCAATAAATGAATCAAAACTTGTTAAGGTCTGGTACATGAAATCTCAATGCAAGTTATTCAATCTTCCTGATCAGAATCAGAATCAGACTCAAGTAGGTGTTGCTTCGCCTCCGGTGAAGGTTTTAGGATTGCTTAAACATGAAGGAATAATAAGATACATGGGAAACAACAATAACATTGAATCAATCATACAAAAACATTTCATAACACATTGGGAAGGAAAAACAGAACTAAAAGTGTACCCTTTGGTGAAATCATTTTCAATTTCATTAGCTTTTCAATTTTTCTTAGGAACTGATGAAACTCATTATGTAGACAAATTTGCCACCAAGTTTGAGAATTTGTTTTCAGGGATTTATTCAGTTCCAATGGATTTTCCTGGCTCTACATATCATAGAGCAATAAAGGGTGCATCTGAAATTAGGAAAGAGATTCAGTATATGATTAAAGACAAGATTGAAGGTTTGTCAAAAGGGAAAGTTATGGATGGTTTATTAGCACATATAGTTGATGCTGAAAAAAGTGGAAAATATGTGCCTAAAATTGAAATAAGTAATACCATCATGGGGTTGATGAATGCTAGCTACATCTCAATAGCTACCACTTTGGCTTTTATGATCAAACACATTGGGTTAAGTCCTCATATCTACCAAAGAATCATATCAGAGCATGCTGATATTAAAAGATCCTCAAAAGAAAGTGGTACATCACAACTAGATTGGGATAGCATACAGAAGCTAAAATATACATGGGCTGTTGCATTGGAGAGCATGAGACTATACTCTCCTGCACCAGGAGCATTCAGAGAGGCTAAAACAGATTTCACCTATGAAGGCTTTACCATTCCAAAGGGATGGAAGATATTCTGGGCATTTATTGGAACAAATAAGAATCCCAAGTACTTTGATAAACCTGAAAGTTTTGATCCATCTAGGTTTGAAGGGAATAATGTTCTTGCACCATACACTTATATACCCTTTGGATCAGGACCAAGATCTTGTCCTGGAAAGGATTACACACGGCTTGCGATTCTCACTTTCATTCACAATCTTGTAACAAAGTTCAAATGGGAAGTTATGCTTCCTGATGAGGAAGTATCTGGTGCTATGATACCTATACCAACAGAGGGAATTCCTATCCGTCTTCATCACTTGTTTTGA | 1434 | 0.355 | MDTFLQSLLLILIPLIAFFCFFLKTKQIGTKNMPPGAFGWPLVGETYQLLFKNIENFIQERAEKHSSEIFKTNLFGEPTVVMFGPAANKFLSINESKLVKVWYMKSQCKLFNLPDQNQNQTQVGVASPPVKVLGLLKHEGIIRYMGNNNNIESIIQKHFITHWEGKTELKVYPLVKSFSISLAFQFFLGTDETHYVDKFATKFENLFSGIYSVPMDFPGSTYHRAIKGASEIRKEIQYMIKDKIEGLSKGKVMDGLLAHIVDAEKSGKYVPKIEISNTIMGLMNASYISIATTLAFMIKHIGLSPHIYQRIISEHADIKRSSKESGTSQLDWDSIQKLKYTWAVALESMRLYSPAPGAFREAKTDFTYEGFTIPKGWKIFWAFIGTNKNPKYFDKPESFDPSRFEGNNVLAPYTYIPFGSGPRSCPGKDYTRLAILTFIHNLVTKFKWEVMLPDEEVSGAMIPIPTEGIPIRLHHLF* | 478 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g3048 | 477 | Pfam | Cytochrome P450 | 178 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr8g3048 | 477 | Gene3D | Cytochrome P450 | 23 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr8g3048 | 477 | SUPERFAMILY | Cytochrome P450 | 31 | 473 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr8g3048 | 477 | PANTHER | CYTOCHROME P450 26 | 15 | 474 | - | - | |
| Mtr8g3048 | 477 | PANTHER | BETA-AMYRIN 28-OXIDASE-LIKE | 15 | 474 | - | - | |
| Mtr8g3048 | 477 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 418 | 427 | IPR017972 | GO:0005506|GO:0016705 | |
| Mtr8g3048 | 477 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr8g3048 | 477 | PRINTS | E-class P450 group I signature | 382 | 406 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr8g3048 | 477 | PRINTS | E-class P450 group I signature | 415 | 425 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mtr8g3048 | 477 | PRINTS | E-class P450 group I signature | 425 | 448 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g3048 | Mtr-Chr8 | 41132749 | 41134654 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr8g3048 | 5 | 476 | Cytochrome P450 | AT3G19270 | 28.543 | 5.96e-66 | 218 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g3048 | K20667 | - | gmx:100782971 | 635.95 |
Event-related genes