Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3030 ATGGAGACCATTTTTGTGGTTCTAGTGATCTTTGTTATTGCTACAAATTCAATCTCAGCAGCACCCTCTCTCTTTACCAAAAATTCTTCATGTCCAGTTGACATGAATTACGTGTTAAGAGTTCCTTGGAACACCTCTACATGCCTTAACTTCCAACCCTTGCAATCCCAAAACAAAGCACAAACAACTCTATGTTGTCAAACTTTGTTGTCTCTTTTTGGCATAGCACTAGCAAAAAATCTCAAGAAGAACTCTCTTTTCCAACTCCCAAATCTCCCTACCTCCACTTCATGCCTTCAAGACTTCCAAACTAAGCTCAGTTCCCTTTCACTTAACAATGACCTTGTGTCTTCATGCTTTGATCCACTTCAGTTTGTTATCACTCCTAACATATGCGCTCGTGTTCAATCTAAGCAAGATTGGATCAGCAGGGTTGGTCCTGCACCATTGTTCAACACTTCTTGTAAACCAGACCTTAGTGTTTCTACCAATTGTGATGCATGTGTTAACCAGGGACTAAAGGTTCAAGAGAAGCTGAATCAAATTGATGGTAATAGTTCACATTCCAAAGATTGCTTTTACTTCACCATCATTTATATTGTTGGAGTTGTGAATGAGTTTGGCCCTGAAAGCAACGGTGCTATGTCATGCATTCTTGAATTGCCTCTTAACTCTCAAGTGGGTTCCAGAAAAAAGAGCTATCATGCTCTTGTTTTTGGGTTAATTGGAGCTTCAATCGGATTCATCGTTATCATGTTCTCTTTGTTTGCCTACTATTTTTGGCACACTAGGAGGATAAAGAGAGTAAGTACTGAAAATTTTCTAGACCTTGCTGATCCAAGTGAACAAAGGTCCGGACCAAGATTGAGACCAAAAACAGGATCAATTTGGTTCAAATTTGATGACCTTGTAAAGGCGACCGACAATTTCTCGCTCCAAAACTATATTGGTAGAGGTGGATTTGGGATAGTTTACAAGGGCATTCTACCTGATGACACAACTGTTGCTGTTAAATGCATGGAAGAATCTGATTTTCAAGGGGATGATGAGTTCTATACCGAAGTGGAGATTATTGGCAACTTGAAACACCGCAATCTAGTGCCATTAAGAGGGTGTTGTGTGGTTGATGACGATCATAATCAAGAGCACAAAAATAGGTATCTTGTTTATGATTATATGCCAAATGGTAACCTTGAAGATCATATCTTTCCATCATTGGACAACGAAAATGAACAGAAATTGTTGACTTGGCCTCAAAGAAAAAACATAATCTTGGATGTGGCAAGTGGGTTGGTTTATTTGCACTTTGGAGTTAAACCTGCTATTTATCACAGAGATATCAAAGCCACCAATATACTACTTGGTGCAGATATGAGAGCAAGGGTTGCAGATTTCGGGCTGGCCAAAGAAAGCAGTGAAAGTAGGTCGCAGCTAAATACAAGAGTAGCTGGAACATATGGATATCTTGCCCCAGAATATGCACTCTATGGTCAGCTAACCGGGAAGAGCGATGTCTATAGCTTTGGTGTGGTTGTTTTGGAGATTATGTGTGGAAGAAAAGCTCTTGAGGTGTCTTCATCAGGAACACCTAATTTCTTGATCACGGATTGGGTTTGGTCGTTAATGAAATCAGGAAACCTAGCAGAAGCTTTCGATGCTTCTATCTTGGTGGATGATGGAAAATCCAATAGTAGGAATATAATGGAGAGGTTTTTGCTGGTTGGAATTCTGTCTTCTCATGTAATAGCTGATTCAAGGCCAACAATTTTGGATGCATTGAAGATGTTAGAAGGAGATATTGAAGTTCAGCCAATTCCAGATAGGCCGATGACTCTTGAGCACCACATGTTTACCAATGGTGATTCTGTTAAACAGTGA 1878 0.3988 METIFVVLVIFVIATNSISAAPSLFTKNSSCPVDMNYVLRVPWNTSTCLNFQPLQSQNKAQTTLCCQTLLSLFGIALAKNLKKNSLFQLPNLPTSTSCLQDFQTKLSSLSLNNDLVSSCFDPLQFVITPNICARVQSKQDWISRVGPAPLFNTSCKPDLSVSTNCDACVNQGLKVQEKLNQIDGNSSHSKDCFYFTIIYIVGVVNEFGPESNGAMSCILELPLNSQVGSRKKSYHALVFGLIGASIGFIVIMFSLFAYYFWHTRRIKRVSTENFLDLADPSEQRSGPRLRPKTGSIWFKFDDLVKATDNFSLQNYIGRGGFGIVYKGILPDDTTVAVKCMEESDFQGDDEFYTEVEIIGNLKHRNLVPLRGCCVVDDDHNQEHKNRYLVYDYMPNGNLEDHIFPSLDNENEQKLLTWPQRKNIILDVASGLVYLHFGVKPAIYHRDIKATNILLGADMRARVADFGLAKESSESRSQLNTRVAGTYGYLAPEYALYGQLTGKSDVYSFGVVVLEIMCGRKALEVSSSGTPNFLITDWVWSLMKSGNLAEAFDASILVDDGKSNSRNIMERFLLVGILSSHVIADSRPTILDALKMLEGDIEVQPIPDRPMTLEHHMFTNGDSVKQ* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3030 625 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 10 609 - -
Mtr8g3030 625 Pfam SPARK 28 193 IPR043891 -
Mtr8g3030 625 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Mtr8g3030 625 ProSiteProfiles Protein kinase domain profile. 310 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3030 625 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 609 - -
Mtr8g3030 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Mtr8g3030 625 Gene3D Phosphorylase Kinase; domain 1 281 392 - -
Mtr8g3030 625 CDD STKc_IRAK 316 598 - -
Mtr8g3030 625 SUPERFAMILY Protein kinase-like (PK-like) 289 596 IPR011009 -
Mtr8g3030 625 SMART serkin_6 310 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3030 625 Pfam Protein kinase domain 312 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3030 625 Gene3D Transferase(Phosphotransferase) domain 1 393 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3030 Mtr-Chr8 40955800 40958164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3030 15 614 Receptor kinase-like Gene Family AT1G11050 58.224 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mtr8g3030 Pkinase 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3030 - - gmx:100788367 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3030 8 40955800 40958164 Mtr8g3030 8 40955800 40958164 ECH
Mtr2g0065 2 725645 728509 Mtr8g3030 8 40955800 40958164 PCT