Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3029 ATGAAATCTAGTTTGGTTCTTTTCCTTGTTTTTCTCATCTTAGTTACAACAGATGCATCAAACTCAACAACATGTCCAGTGTCCATGAAATTTGTCTCAACAGTTCCTTGGAACAAATCTCTTTGTCTTAACTTCCAACCTTTAACATCCAAAACAGAAACACAAGAAACTCTTTGTTGTAAAACTCTCTTATCTCTCTTTGGTATAGCACTTGCTGAAAATCTCAATAAGAACTCACTTTTCAATTTTCACAACATAACTACCTCAACCTCTTGTCTACATAATTACCAAACTAGCCTCACTTCAATTTCACTTCCTAACAACCTTGTCTCTTCATGCTTTGATCCATCTCAATTTGTTGCCACACCAGACACATGTGCTCAAATTCAAACCAAACAAGATTGGCTTAACAAAGTTGATTCAACAGATTTAACTGTTCTTGATAATGTTTGTGAACCAGATTTAACAGATTCGGATCATTGTCATGTTTGTAAAAATCAAGGGTTTAAGGTTCAACAGATGCTGACTAAATTTGATGGTAATAGTTCACATTCTCAAGATTGTTTTTATTTTACAATACTATATATAGCTGGAATTGTGAATAAACTTGGTCCTGAGAGTACAGGTGTTTTGGCTTGCATTCTTATTTTGTTGGTACCACATGAGTATTCTGAAAAGGAACATCATCATCGTGCTCTTGTTATTGGATTGGTTGTAGCTTCATTAGTATTTGTGTCATTTTTGTTAGGGTTATTGTATTTTTGGTATGTTTGGTGGGTGAAGAAAAAAAACAATGAAAATTTGTTACCACATAATGGTGGTTCACAAGAGCCTAGTTTTAGTTTAAGAGTTAGGCCTAAAAGTGGGTTGATTTGGTTTAATTTTAAGGATCTTGTGAAGGTTACTGACAACTTTTCGGCCCAAAATTTCATTGGAAGAGGCGGGTCTGGTTCGGTTTACAAGGGGGTTTTACCGGATGAGACGATTGTTGCGGTTAAAAGGATTGAAGAATCTGATTATCAAGGAGATGTTGAGTTTTACAGAGAGGTGGGGATTGTTAGTAGCTTGAAACATCGCAATTTGGTGCCGCTAAGAGGATGTTGTGTTGTTGGTGAAGATGAGAATCCTGAGTACTTTGGAAAGTATCTTGTCTATGATTATATGCCGAATGGTAGTCTTAAAGACCATCTTTTCCCTGAAATGGATAACCAAAATGAAAAACAATCTTTGACTTGGTCTCAAAGAAAAAACATAATCTTGGATGTGGCGAACGCGTTGGTTTATTTGCACTTTGGAGTTAAGCCTCCTGTTTATCACAGAGATATCAAAGCTACCAATATACTACTTGATGCAGGTATGAGAGCAAGGGTTGCAGATTTCGGGCTGGCGAAACAGGACTACAGTCAAAATATGTCTCAGCCAAATACTAGAGTAGCCGGAACTCGTGGATATCTAGCTCCAGAATATGCACTTTATGGTCAGTTAACCGAGAAGAGTGATGTCTATAGTTTTGGCGTGGTTGTTCTTGAGATAATGTGTGGAAAAAAGGCTCTTCAGTTGTCTTCGTCTGGAGAGCCTAATTTCTTGATCACGGATTGGGTTTGGTCGTTGATGAAATCTGGAAACACAATGAAGGCTTTGGATGCTTCTATATTATTGGATGGAAATTCCACTAGAAGCATAATGGAGAGATTTTTGATGGTTGGAATTTTGTGCTGTCATGTAGTAGTTGCTTTAAGGCCCACAATTTTGGATGCTTTGAAGATGCTAGAAGGGGACATTGAGGTTCCATCAATTCCAGATAAGCCAACAACTGTAGGAAATCGCATGTTTGCCAACGGTGATTCAACTTATGGTTTGCTAAAAGTTTAA 1872 0.3734 MKSSLVLFLVFLILVTTDASNSTTCPVSMKFVSTVPWNKSLCLNFQPLTSKTETQETLCCKTLLSLFGIALAENLNKNSLFNFHNITTSTSCLHNYQTSLTSISLPNNLVSSCFDPSQFVATPDTCAQIQTKQDWLNKVDSTDLTVLDNVCEPDLTDSDHCHVCKNQGFKVQQMLTKFDGNSSHSQDCFYFTILYIAGIVNKLGPESTGVLACILILLVPHEYSEKEHHHRALVIGLVVASLVFVSFLLGLLYFWYVWWVKKKNNENLLPHNGGSQEPSFSLRVRPKSGLIWFNFKDLVKVTDNFSAQNFIGRGGSGSVYKGVLPDETIVAVKRIEESDYQGDVEFYREVGIVSSLKHRNLVPLRGCCVVGEDENPEYFGKYLVYDYMPNGSLKDHLFPEMDNQNEKQSLTWSQRKNIILDVANALVYLHFGVKPPVYHRDIKATNILLDAGMRARVADFGLAKQDYSQNMSQPNTRVAGTRGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGKKALQLSSSGEPNFLITDWVWSLMKSGNTMKALDASILLDGNSTRSIMERFLMVGILCCHVVVALRPTILDALKMLEGDIEVPSIPDKPTTVGNRMFANGDSTYGLLKV* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3029 623 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Mtr8g3029 623 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 13 605 - -
Mtr8g3029 623 Pfam SPARK 20 189 IPR043891 -
Mtr8g3029 623 SMART serkin_6 305 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3029 623 ProSiteProfiles Protein kinase domain profile. 305 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3029 623 Gene3D Phosphorylase Kinase; domain 1 275 387 - -
Mtr8g3029 623 Gene3D Transferase(Phosphotransferase) domain 1 388 598 - -
Mtr8g3029 623 CDD STKc_IRAK 311 592 - -
Mtr8g3029 623 Pfam Protein kinase domain 308 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3029 623 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 605 - -
Mtr8g3029 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Mtr8g3029 623 SUPERFAMILY Protein kinase-like (PK-like) 282 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3029 Mtr-Chr8 40947533 40951392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3029 20 614 Receptor kinase-like Gene Family AT1G11050 54.305 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mtr8g3029 Pkinase 4.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3029 - - mtr:MTR_8g088760 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3029 8 40947533 40951392 Mtr8g3029 8 40947533 40951392 ECH