Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3025 ATGGATCAAGTTCAAGGTGGTGGTAATGAGTATCCAGTTTTCTTACATGGTGACTTAGATCTATTTATCATAGAAGCAAAATCTCTTCCAAATCTAGATTTATCAACTGAAGCAATTAGAAAATGTCTAACTATGGGAAATAGTTGCACACCACCTTTTGTAAAAGGACTCAAAACCCACTCAGGAAAAGACAAGATCATAACAAGTGACCCTTATGTATCTATTTGTCTAGCTGGTGCAACCATAGCACAAACAAGAGTCATTCCGAATTGCGAAAACCCTTTATGGGATGAACATTTTCTTGTTCCTGTTGCTCATCCTGCTCACAAAATTGAATTTCTAGTAAAAGATAATGATATTCTTGGTGCTGAACTCATTGGAGTTGTGGAAATACCTGTTCAAAAGATACTCTCTGGAAACATTCTTAATGATTGGTTTCCAATTATTGGTCAATATGGAAACTGCTTGAAACCTTATCCTGAACTGCATATTTCAATTCAGTATATGTCTATTGATGTTAATGAAGATAATGGAAGTGTTAATTATGGCGTTCCTGGTACATATTTTCCTCTTAGAAGAGGAGGGAATGTCACTCTTTATCAAGATGCACATGTACCGGATGGTATGCTACCTGAGATCGAACTCGAAGGTGGAAAAATGTTTCAACATAGTAAATGTTGGGAGGATATTTGTCATGCAATTTTGGAAGCTCATCATATGATATATATTATTGGATGGTCGATTTTTCACCCTGTGAAGCTTGTTCGAGAGCCAACAAAACCATTGCCGTCTGGTGGAGAGCTTTCACTTGGAGAACTTTTGAAATATAAGTCACAAGAAGGGTTAAGAGTTGTTATGTTGATTTGGGATGACAGGACTTCACATGACAAGTTTCTTTTGAAAACAGAAGGTGTGATGCAGACTCATGATGAAGAAACTAAAAAGTTTTTTAAACATTCAACAGTTCATTGTATATTATCTCCGCGTTATGCAAGCAATAAACTCAGTATTTTCAAGCAACAGGTTGTGGGAACACTCTTTACGCATCACCAGAAATGTGTGCTTGTAGACACACAAGGTTCTGGGAATAATCGGAAAATAACCGCTTTTATTGGTGGTCTTGACCTGTGTGATGGCAGATATGATACTCCTGAGCATAGGCTTTTTAGTGATCTTGATACAGTCTTTCAAAATGATTTCCATAATCCTACATTTCAATTAAATTCTAACTCTTCTGCACCAAGGCAACCATGGCATGACTTACATTGCAAAATTGAAGGTCCGGCTGCATATGATATATTGACCAACTTTGAACAAAGATCAAGGAAGGCCAAAAAATGGCGCGACTTCAGGCTCAGAAAAGTAACAAACTGGCATGATGATGCTTTGCTAAGGCTAGATCGTATTTCATGGATTGTCAAGCCATCTTCTGGTCCTGATGGTGATAAATCTGTTCGTGTAACCGAAGAAACTGATCCTGAGAATTGGCATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTGAAGGGATTTCCAAAGGATGTTGACAAAGCAAAGGCTCAGAATCTTTTATGTGGAAAAAACTTAAAAGTTGACCAAAGCATCCATGCTGCTTATGTAAAAGCAATAAGATCGGCTCAGCGCTTCGTTTATATTGAGAATCAGTATTTTCTAGGCTCCTCATATCATTGGCCTACGTATAGAAATGCAGGTGCAAATCACTTGATTCCAATGGAGTTGGCATTAAAAATTGCAAGCAAGATAATCGCACATGAACGATTTTCTGTGTATATAGTCATACCAATGTGGCCAGAAGGAGTTCCAACTAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAAACAATGTCTATGATGTATAAGATTGTTGCAGATGCACTTGCAAAAGCAGGTCTCTCTGAATGTTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCTCATTCGCGTGAAAGTCTATCAACACAAAGTCAATCATCTGAAAATCGCGCCTTGTTCAGGCGTTTTATGATTTATGTTCATGCTAAAGGAATGATAGTTGATGATGGATATGTAATAATTGGATCAGCAAATATTAATCAGAGATCAATGGATGGATCAAGGGACACAGAAATAGCCATGGGGGCTTATCAACCAAAACATACATTGGCAGAAAAGAACTCTCTTCCACGTGGCCAGGTGTATGGATACCGAATGTCACTTTGGGCTGAGCATCTTGGCGGTATTGATGGCAGTTTTACTGAACCTCACACCTTGGAATGTGTTAGACGTGTGAATAGAATTGCTAGAAAAAATTGGAGCATATATGTGTCTGAGGAAAGTCTTCAAATGAAGGGAAACTTAATGCATTATCCAGTTCATGTGAGCAGAAATGGAAAAGTCAGTACACAAGAGGGTCAAGAGTATTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACAAAATTCACTTCCGGATGCACTAACTACGTGA 2514 0.3839 MDQVQGGGNEYPVFLHGDLDLFIIEAKSLPNLDLSTEAIRKCLTMGNSCTPPFVKGLKTHSGKDKIITSDPYVSICLAGATIAQTRVIPNCENPLWDEHFLVPVAHPAHKIEFLVKDNDILGAELIGVVEIPVQKILSGNILNDWFPIIGQYGNCLKPYPELHISIQYMSIDVNEDNGSVNYGVPGTYFPLRRGGNVTLYQDAHVPDGMLPEIELEGGKMFQHSKCWEDICHAILEAHHMIYIIGWSIFHPVKLVREPTKPLPSGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTEGVMQTHDEETKKFFKHSTVHCILSPRYASNKLSIFKQQVVGTLFTHHQKCVLVDTQGSGNNRKITAFIGGLDLCDGRYDTPEHRLFSDLDTVFQNDFHNPTFQLNSNSSAPRQPWHDLHCKIEGPAAYDILTNFEQRSRKAKKWRDFRLRKVTNWHDDALLRLDRISWIVKPSSGPDGDKSVRVTEETDPENWHVQVFRSIDSGSVKGFPKDVDKAKAQNLLCGKNLKVDQSIHAAYVKAIRSAQRFVYIENQYFLGSSYHWPTYRNAGANHLIPMELALKIASKIIAHERFSVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIVADALAKAGLSECYHPQDYLNFYCLGKREPHSRESLSTQSQSSENRALFRRFMIYVHAKGMIVDDGYVIIGSANINQRSMDGSRDTEIAMGAYQPKHTLAEKNSLPRGQVYGYRMSLWAEHLGGIDGSFTEPHTLECVRRVNRIARKNWSIYVSEESLQMKGNLMHYPVHVSRNGKVSTQEGQEYFPDVGGKILGSQNSLPDALTT* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3025 837 ProSiteProfiles C2 domain profile. 1 146 IPR000008 -
Mtr8g3025 837 PANTHER PHOSPHOLIPASE D 12 837 IPR015679 -
Mtr8g3025 837 Gene3D Endonuclease Chain A 216 462 - -
Mtr8g3025 837 Pfam Phospholipase D Active site motif 346 380 IPR001736 GO:0003824
Mtr8g3025 837 Pfam PLD-like domain 672 719 IPR025202 -
Mtr8g3025 837 Gene3D Endonuclease Chain A 502 735 - -
Mtr8g3025 837 Gene3D C2 domain 13 169 IPR035892 -
Mtr8g3025 837 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 683 710 IPR001736 GO:0003824
Mtr8g3025 837 PIRSF PLD_plant 5 837 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mtr8g3025 837 Pfam C2 domain 17 148 IPR000008 -
Mtr8g3025 837 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 345 380 IPR001736 GO:0003824
Mtr8g3025 837 SMART pld_4 345 380 IPR001736 GO:0003824
Mtr8g3025 837 SMART pld_4 683 710 IPR001736 GO:0003824
Mtr8g3025 837 PANTHER PHOSPHOLIPASE D 12 837 - -
Mtr8g3025 837 Pfam Phospholipase D C terminal 759 827 IPR024632 -
Mtr8g3025 837 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 170 IPR035892 -
Mtr8g3025 837 SMART C2_3c 18 145 IPR000008 -
Mtr8g3025 837 SUPERFAMILY Phospholipase D/nuclease 534 752 - -
Mtr8g3025 837 CDD C2_plant_PLD 12 169 - -
Mtr8g3025 837 SUPERFAMILY Phospholipase D/nuclease 188 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3025 Mtr-Chr8 40917987 40922096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3025 6 836 Phospholipase D Gene Family (Wang group) AT2G42010 53.341 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3025 K01115 - gmx:100779740 1452.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3025 8 40917987 40922096 Mtr8g3025 8 40917987 40922096 ECH