Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3023 ATGGCGAATTCAAAGAGCTCATCGGGTGTCAGAAATTTGATGTATCCTGGAAGGCATGCACATGCTCTGCTTCCTCCCAAAAGCCCATTTCCTAGTACCTCCCAAGCATATGCTGATTATGTCTCTAACCCTACAGTTGGTCCAAAGCCGGTTAATAAGCCACGAGAAGGAAACTCGCATCACCAACGTACTTCATCTGAGAGCCATCTTATCGAGGAGCAGCCATCGTGGCTTGATGATCTCCTAAATGAGCCAGATACACCTGTCAGAAGGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATATATTGACAATATTAATGCGTCTAACATCAATTATGCGGATCATGATGAGTATAAATATAAGAATTTATCTATTCCGGCTTGGTCACCTCCAGACTTTGACCGCAACAAAGATGCCCGTCATGTACCTATGTATGCAGAAATCAATGCAGCAAAACAGAGGAATAGGTCATGGGACTCTTTTTCAAATATGAGTGGTGTTCCATCTGGCAAAGACAATGTTGCTTTTCAGAGATCAGGATCACCGACTCCATGTACACTATACGAACCGGATCGGATCCTACTGACTGCAAATGAAAATCACGATTCATTAGAAGCTGGCGTACAAGACACAAAATCACCTTTTGAAAAAAAGGATGGTTTACATGCAAAGTCATCTGCTTCTGAAACAGATTCAAAACGTGCTAAACAGCAATTTGCTCAACGGTCACGGGTCCGTAAACTTCAGTACATAGCCGAGCTGGAAAGAAATGTACAGGCTTTACAGGCAGAAGGGTCTGAAGTATCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCGCAGGAGCAGCTTATCAAATATCTGGAGCAGGAAGTACTGGAGAGAGAGATTGGAAGATTACGTGGCATGTACCAACAGCATCTGCAGCAGGCACAGCAGCCTCAACAACAACCATCTGGCAGCCATAGACGGACAAACAGCAGAGACCTTGATTCTCAGTTTGCTAACCTTTCTCTGAAGCACAAGGACACAAATTCGGGGCATGACCCTGCAAACGGAGCACTCAGAATTTAG 1134 0.4409 MANSKSSSGVRNLMYPGRHAHALLPPKSPFPSTSQAYADYVSNPTVGPKPVNKPREGNSHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYIDNINASNINYADHDEYKYKNLSIPAWSPPDFDRNKDARHVPMYAEINAAKQRNRSWDSFSNMSGVPSGKDNVAFQRSGSPTPCTLYEPDRILLTANENHDSLEAGVQDTKSPFEKKDGLHAKSSASETDSKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRGMYQQHLQQAQQPQQQPSGSHRRTNSRDLDSQFANLSLKHKDTNSGHDPANGALRI* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3023 377 Coils Coil 247 302 - -
Mtr8g3023 377 SUPERFAMILY Leucine zipper domain 243 285 IPR046347 GO:0003700|GO:0006355
Mtr8g3023 377 Gene3D - 235 288 - -
Mtr8g3023 377 MobiDBLite consensus disorder prediction 325 377 - -
Mtr8g3023 377 CDD bZIP_plant_RF2 236 282 IPR044759 GO:0003700|GO:0006355
Mtr8g3023 377 SMART brlzneu 232 291 IPR004827 GO:0003700|GO:0006355
Mtr8g3023 377 MobiDBLite consensus disorder prediction 325 343 - -
Mtr8g3023 377 MobiDBLite consensus disorder prediction 20 99 - -
Mtr8g3023 377 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 1 365 - -
Mtr8g3023 377 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 365 IPR044797 -
Mtr8g3023 377 MobiDBLite consensus disorder prediction 209 243 - -
Mtr8g3023 377 MobiDBLite consensus disorder prediction 214 241 - -
Mtr8g3023 377 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3023 Mtr-Chr8 40889659 40894166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3023 22 306 bZIP Transcription Factor Family AT2G42380 30.921 1.46e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3023 - - cam:101495568 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3023 8 40889659 40894166 Mtr8g3023 8 40889659 40894166 ECH