Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3020 ATGAATAGAAACTTAGTTTTTGTTTCAACAATCTTTGTTTGTCTCGTAGTGGTTGCCTTGAGTAACCACCAGAATGAGAAGATTACCACTGAGGAAGCCTCTCCGCACCTTCTTGAGGTGGATTATGGGAGATATCCAACTTGGTTTTCTCTTTCTAATCGTAAACTATTAAAAACCGAAATGAAACCCAATTCAATAGTGGCTAAGGACGGTAGTGGCGAATTTACTACCGTTACTGATGCCATTAACTCATACTCGTCGAAGAAAAATCGACATAGATTCATCATCTATGTCAAGGCCGGTATCTACAACGAGTACATTACGATTGACAAGGACAAGACTAACATTCTTTTGTACGGTGATGGCCCTACGAAGACAATTATCACCGGAAGCAAGAGTCTCAATGGAGGAGTGAATAAAACAATGAACACAGCCACCTTCACCAACCTTGCTAAAGATTTCATTGCGAAGTCAATTACATTTGAAAACACTGCGGGTCATGAAGCTGGCCCATCAGTGGCACTTCAAGTGGAAGGTGATCGTTCGGCATTCTTTGATTGTGGAATTTATGGTTATCAAGACACATTGTATGCGCACAAACAGCGCCAGTTCTACCGCAATTGTGAGATCTCTGGAACCATTGATTTCATCTTTGGGCATTCAACTACCTTAATCCAAAACTCCAAAATAATTGTGAGGAAGCCGAGTCCAGGCCATAGCAACGTTGTGGTGGCAGACGGAACAAAGCAAAAGAATGCCCTAACTGGAATAGTCCTTCAAAATTGCTCGATCATGCCAGATGTTGAACTTTTACCTGATAGGTTGACGGTGAAGACTTATTTGGCAAGGCCATGGAGGTCATTTTCTAGGGCAATATTTATTAATAATGTTATAGGTGATTTTATTCAACCTGATGGGTATTCTGTTTGGGCTCCTAATGAAACAAACACTGCACATTGTTACTTTGCTGAGTTTGGTAACACTGGACCTGGTGCTAATACTCAAGCTAGGGCAAAATGGAGTAAAGGTGTTATTAGTAAGGATGAGGCTGCTAAATTCACTGCTGAAAATTGGCTTCAAGCTAGCACTTGGTTGCCTGCCACTGGCATTCCTTTCAGTCCTGAATTTGAGTCTTGA 1137 0.4142 MNRNLVFVSTIFVCLVVVALSNHQNEKITTEEASPHLLEVDYGRYPTWFSLSNRKLLKTEMKPNSIVAKDGSGEFTTVTDAINSYSSKKNRHRFIIYVKAGIYNEYITIDKDKTNILLYGDGPTKTIITGSKSLNGGVNKTMNTATFTNLAKDFIAKSITFENTAGHEAGPSVALQVEGDRSAFFDCGIYGYQDTLYAHKQRQFYRNCEISGTIDFIFGHSTTLIQNSKIIVRKPSPGHSNVVVADGTKQKNALTGIVLQNCSIMPDVELLPDRLTVKTYLARPWRSFSRAIFINNVIGDFIQPDGYSVWAPNETNTAHCYFAEFGNTGPGANTQARAKWSKGVISKDEAAKFTAENWLQASTWLPATGIPFSPEFES* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3020 378 PANTHER PECTINESTERASE 32 376 - -
Mtr8g3020 378 Pfam Pectinesterase 65 361 IPR000070 GO:0030599|GO:0042545
Mtr8g3020 378 ProSitePatterns Pectinesterase signature 1. 90 109 IPR018040 -
Mtr8g3020 378 PANTHER PECTINESTERASE 32 376 - -
Mtr8g3020 378 SUPERFAMILY Pectin lyase-like 62 374 IPR011050 -
Mtr8g3020 378 Gene3D - 58 376 IPR012334 -
Mtr8g3020 378 ProSitePatterns Pectinesterase signature 2. 210 219 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3020 Mtr-Chr8 40862563 40864574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3020 36 373 Carbohydrate Esterase AT2G47030 43.380 1.08e-94 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3020 K01051 - gmx:100808559 481.1