Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3018 ATGGAAAACATTGCCGCGCAACTAAAGCGCGGCATCTCGCGCCAATTCTCCTCCGGCTCTTTACGCAAAACTCTCAGCCGTCAATTCACACGTCAAGCATCGCTCGATCCACGTCGGAACAATCTCCGATTCAGCTTCGGTCGTCAATCATCGCTGGACCCGATCCGACGGAGTCCAGGTGATGATGAAGACCAGGCGGAACTCACCGTACCGGAGAATCTCGATTCCACCATGCAGCTTCTCTTCATGGCGTGTCGTGGTGATGTTAAAGGGGTTGAGGATTTGCTTAACGAAGGAATTGATGTTAATAGCATTGATCTTGATGGCCGTACTGCTCTTCATATCGCTGCTTGTGAAGGACATGTTGATGTTGCGAAGCTTTTGCTCAGCCGTAAGGCCAATCTTGATGCTCGTGATCGTTGGGGTAGTACGGCAGCGGCTGATGCTAAATATTATGGAAATACAGAAGTTTATTATATCTTGAAGGCACGTGGAGCAAAAGTGCCGAAAACCAGGAAGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCTGAATATGAACTCAATCCGTTAGAACTACAGGTTCGGAAGAGTGATGGTATTTCAACGGGGACATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCGGTGAAGATACTTGATAAGGACAGTTATTCAGATCCTGATACCATAAATATTTTCAAACACGAGCTCACACTATTGGAAAAGGTGCGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAACATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGGTGACTTAACAGGTTATATTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACGGTTTTCTCTTGATATTGCTAGGGGCATGAATTATCTTCATGAATGCAAGCCAGATCCTATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGTCAACTGAAGGTAGCTGGATTTGGCACTGTGAGATTTTCACTAATAACACCTGACAAAGCATTGTTAGAACAGCCTGAGGCCAACATTGACCCTTCAAGCTTGTACGTGGCACCGGAGATTTACAGAGGTGATGTATTTGATAGAAGTGTGGATGCGTATTCTTTTGGTCTCATTGTATATGAGATGATAGAGGGTATACCGCCCTTCCATCCCAAGCCCGCAGAGGAAGCTTTGAAACTGATGTGTTTAGAAGGGAAGAGACCACAATTCAAGATCAAAACAAAGAGTTATCCTCCGGATTTGAAAGAGTTGATTGAGGAATGCTGGGATCCAGAACCTGAGGTCAGACCAACATTTTCTCAGGTCATTGCCCGGTTGGACAAAATTGTTGCGAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTTCCTTGGAAATAA 1434 0.4421 MENIAAQLKRGISRQFSSGSLRKTLSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSPGDDEDQAELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVDVAKLLLSRKANLDARDRWGSTAAADAKYYGNTEVYYILKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRKSDGISTGTYQVAKWNGTKVAVKILDKDSYSDPDTINIFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLTGYIQKKGRLSPSKVLRFSLDIARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKVAGFGTVRFSLITPDKALLEQPEANIDPSSLYVAPEIYRGDVFDRSVDAYSFGLIVYEMIEGIPPFHPKPAEEALKLMCLEGKRPQFKIKTKSYPPDLKELIEECWDPEPEVRPTFSQVIARLDKIVANCSKQGWWKDTFKLPWK* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3018 477 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 475 - -
Mtr8g3018 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Mtr8g3018 477 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Mtr8g3018 477 Pfam Protein tyrosine and serine/threonine kinase 204 455 IPR001245 GO:0004672|GO:0006468
Mtr8g3018 477 Pfam Ankyrin repeats (3 copies) 82 168 IPR002110 GO:0005515
Mtr8g3018 477 SUPERFAMILY Protein kinase-like (PK-like) 207 455 IPR011009 -
Mtr8g3018 477 SMART ANK_2a 108 137 IPR002110 GO:0005515
Mtr8g3018 477 SMART ANK_2a 76 104 IPR002110 GO:0005515
Mtr8g3018 477 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 475 - -
Mtr8g3018 477 ProSiteProfiles Protein kinase domain profile. 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3018 477 CDD STKc_MAP3K-like 202 455 - -
Mtr8g3018 477 Gene3D Transferase(Phosphotransferase) domain 1 273 473 - -
Mtr8g3018 477 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Mtr8g3018 477 Gene3D - 48 187 IPR036770 -
Mtr8g3018 477 Gene3D Phosphorylase Kinase; domain 1 188 271 - -
Mtr8g3018 477 SMART serkin_6 196 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3018 477 PIRSF ILK 8 476 - -
Mtr8g3018 477 SUPERFAMILY Ankyrin repeat 77 177 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3018 Mtr-Chr8 40837778 40844024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3018 1 476 MAP Kinase Kinase Kinase AT2G43850 77.615 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Mtr8g3018 PK_Tyr_Ser-Thr 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3018 - - aprc:113857978 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3018 8 40837778 40844024 Mtr8g3018 8 40837778 40844024 ECH