Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3009 ATGGGTAATTGTTGCTATAAGTGGGATTCATCAGATTATAGAGTCTCATCCAATGCAAAATCAGAACAAAACCAGGTGGCAATGAAAGAAAGGCACGATGATAGTAAGTTACCATCGAATCCTGAAGAAGTTGAAGATCTTAGACGTGATAACTCAGCTGCAAATCCATTGATTGCATTCACTTATGATGAACTAAAGAAAATAACTGGGAATTTTAGACCAGATCGTGTGTTAGGGGGAGGTGGATTTGGAAGTGTTTATAAAGGATTTATTTCTGAGGAGTTAAGGGATGATCTTCATTCTCTTCCTGTAGCTGTTAAGGTTCATGATGGTGACAATAGTCATCAAGGCCACAGAGAATGGCTGGCAGAAGTGATATTTTTGGGGCAGCTTTCACATCCAAATTTGGTCAAATTAATTGGATACTGCTGCGAAAACGAACATAGGGTGCTAATATATGAGTACATGGCCAGAGGAAGTGTGGAACACAATTTGTTCTCAAAAATTTTGCTTCCCTTGCCATGGTCGATAAGAATGAAGATTGCATATGGCGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAAAAAAACCCGTCATCTATCGTGATTTTAAGACATCGAATATTTTATTGGACCTGGACTATAATGCAAAGCTTTCTGACTTTGGCCTTGCTAAAGATGGACCAGTTGGAGACATGTCCCATGTTTCTACTAGAATAATGGGAACATATGGATATGCTGCACCAGAATACATTATGACAGGTCATTTGACTCCAAGAAGTGATGTTTATAGTTTTGGTGTTGTTCTTCTTGAACTTTTGACTGGAAGAAAATCTTTAGACAAACAAAGACCAGCTAGAGAGCAAAACCTTATAGATTGGGCTCTTCCATTGCTCAAAGAAAAGAAGAAAGTGCTAAATATTATAGATCCAAGGTTGGAAGGTGATTATCCAGTAAAAGGAGCTCACAAGGCTGCAATGCTTGCATATCATTGCTTAAACAAGAATCCAAAAGCAAGGCCTTTAATGAGAGACATTGTTGATTCATTAGAGCCTTTGACAACGTACACTGAGGTCCCTATTGGAAAAACATTTACCATAATAACTGAAGTTGCTGAAACTGATGTTAAAAGGAAAGATGCAGAATGA 1149 0.3829 MGNCCYKWDSSDYRVSSNAKSEQNQVAMKERHDDSKLPSNPEEVEDLRRDNSAANPLIAFTYDELKKITGNFRPDRVLGGGGFGSVYKGFISEELRDDLHSLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCENEHRVLIYEYMARGSVEHNLFSKILLPLPWSIRMKIAYGAAKGLAFLHEAKKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDMSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKQRPAREQNLIDWALPLLKEKKKVLNIIDPRLEGDYPVKGAHKAAMLAYHCLNKNPKARPLMRDIVDSLEPLTTYTEVPIGKTFTIITEVAETDVKRKDAE* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3009 382 Gene3D Transferase(Phosphotransferase) domain 1 156 364 - -
Mtr8g3009 382 SUPERFAMILY Protein kinase-like (PK-like) 50 350 IPR011009 -
Mtr8g3009 382 MobiDBLite consensus disorder prediction 16 48 - -
Mtr8g3009 382 Pfam Protein tyrosine and serine/threonine kinase 75 350 IPR001245 GO:0004672|GO:0006468
Mtr8g3009 382 MobiDBLite consensus disorder prediction 25 48 - -
Mtr8g3009 382 ProSitePatterns Protein kinases ATP-binding region signature. 78 107 IPR017441 GO:0005524
Mtr8g3009 382 Gene3D Phosphorylase Kinase; domain 1 32 155 - -
Mtr8g3009 382 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3009 382 PANTHER OS01G0588500 PROTEIN-RELATED 9 363 - -
Mtr8g3009 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mtr8g3009 382 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 9 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3009 Mtr-Chr8 40712916 40719478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3009 31 355 Glycoside Hydrolase AT3G07070 49.102 2.62e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr8g3009 PK_Tyr_Ser-Thr 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3009 - - gmx:100775722 668.307