Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2981 ATGCAGGGGAACAATCACAGTCTTCCTTTAACACCGAGGTCGAGATTGGAAAGGCTTTTGAGAGAAAGAGAACTAAGGAAATCGAGCCGGTATACTCAATCGGCCGAGGACGGAAGAGATGGTGGCAAAGAGGGAGAGCAACTTTACAGTGATTCATTCATAAATGAGAATGACAATGAGGAAGAGGTCGCGGAAACGTTGTTTGCGGATGATAGGCCTCGCAAACAACGTTTGTTGGTGGTAGCTAACAGGTTGCCTGTCTCTGCTGTTAGGGAGGGTGTGGAATCGTATCACCTTGAGATCAGTGTTGGTGGTCTTGTCAGTGCACTTTTAGGTGTAAAGGAGTTTGACACAAGATGGATTGGGTGGGCTGGTTTGAATGTGCCTGATGAAGTTGGGCAGAAAGCTTTGACTAAAGCTTTATCTGAAATGCGATGCATCCCAGTGTTTCTTGACGAGGAAGTAGTTAATGAGTACTATAATGGCTATTGCAACAACATCTTGTGGCCACTATTTCATTATCTTGGACTTCCACAAGAGGACAGGCTTGCTACAACGCGGAGTTTCCAAACTCAATTCGATGCGTATAAGAAGGCGAACCAAATGTTTGCTGATGTAGTGAATCAGCATTATGAGGATGGAGATGTTGTCTGGTGCCATGATTATCACCTAATGTTTCTTCCAAGATGTTTAAAAGAATACAATGACAAAATGAAAGTTGGATGGTTTCTCCATACACCTTTTCCTTCTTCAGAAATACATAGGACTCTGCCATCAAGATCAGAGCTGTTGAGATCTGTACTTGCCGCTGACCTTGTCGGATTCCATACTTACGATTATGCACGGCATTTTGTAAGTGCTTGTACTCGAATTCTTGGGATAGAAGGTACGCCTGAAGGAGTAGAAGATCAAGGGAAGCTAACTCGTGTGGCTGCGTTTCCTATTGGAATTGACTCTGAAAGATTTATTCGAGCCCTTGCGCTTCCTGAAGTCCAGACTCACATGAAAGATTTGAAGGAAAGATTTGCAGGCCGAAAGGTAATAATGGGTGTTGATCGTCTTGATATGATAAAAGGAATTCCCCAGAAAATCTTGGCATTCGAGAAGTTCCTTGAGGAGAATTCTCATTGGCGTGATAAAGTTGTCTTGCTGCAAATTGCTGTACCTACTAGGACAGATGTTCCTGAATATCAAAAGCTTACGAGCCAGGTGCATGAAATTGTAGGACGCATCAATGGAAGATTCGGAACACTTACTGCTGTCCCAATACACCATCTGGACCGATCACTTGACTTTCATGCATTATGTGCACTCTATGCTGTTACTGATGTAGCACTTGTAACATCATTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCGTGTCAAGCTTCCAAGAAGGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCGCAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAATATCACAGAGGTTGCTGCTTCTATTGGTTATGCTTTGGACATGCCAGCTGATGAAAGGGAAAAACGGCATCAGTTTAATTTCAAGCATGTGACAACTCACACGTCACAAGAATGGGCTGCAACTTTTGTTAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGGACAAGACAAGTTCCTCCATTACTTCCCAATAAAGTGGCAGTTGATTGTTACTCAAAATCCAATAACCGATTAATCATACTGGGTTTCAATGCCACTCTTACTGAACCAGTGGATCCTTTTGGAAGGGGTGGTCAGATTAAAGAACTAGAACTAAAAGTGCACCCAGATATGAAGGAACCTTTAAAGAAGCTATCTGATGACCCAAAGACAACAGTGGTTGTTCTGAGTGGGAGTGGTAGAGCTGTCCTAGACAAAAACTTTGGTGAATACAATATGTGGTTGGCAGCAGAAAATGGGATGTTTTTGCGACTTACTTCAAGTGAATGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGCGTAAAGCATGTTTTTGAGTATTTTACTGAAAGAACCCCGCGGTCTAATTTTGAGCTACGCGAGACTTCAGTAATATGGAATTATAAGTATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGAGACCTTCTTCAGCATCTTTGGACAGGCCCAATATCAAATGCATCTCTTGATGTTGTCCAAGGTGGTCGATCTGTCGAGGTCCGTGCAGTTGGTGTGTCAAAGGGAGCAGCTATTGATCGTATCCTGGGAGAGATAGTTCATAGCAAAGGCATGAAGGAACCAATTGATTACGTCCTATGCATTGGCCACTTTCTAGCAAAGGATGAAGATGTCTATAAATTTTTTGAGCCAGAGCTCCCCTCTGAAGTATCTCCAATGGCAAAAGCTATGCGATCAAATTCTTGCAGACCATCATCTCTGCCAAGATTTTCATCCGGCAAAAATGGTCCAAAAGCATCCCAGTACAAGAAGCAACGTTCACTGTCAAATATAGATAGGAGAGAGGTCGACCCTGCAAGTGGTGATCCTTGGAGACCAACAGGTCGTGATAGAACATCACTACATGAAGGTTCTTCTGTTCTTGATCTTAAAGGTGACAATTACTTCTCCTGTTCTGTTGCACGAAAGAGATCAAGTGCCCGCTACCTTCTTAAAACCTCACAAGATATTGTCAATCTCTTAAGTGACCTGGCGGATCGTTCTTCATCTCCATCAACTTGA 2748 0.4287 MQGNNHSLPLTPRSRLERLLRERELRKSSRYTQSAEDGRDGGKEGEQLYSDSFINENDNEEEVAETLFADDRPRKQRLLVVANRLPVSAVREGVESYHLEISVGGLVSALLGVKEFDTRWIGWAGLNVPDEVGQKALTKALSEMRCIPVFLDEEVVNEYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQTQFDAYKKANQMFADVVNQHYEDGDVVWCHDYHLMFLPRCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGIEGTPEGVEDQGKLTRVAAFPIGIDSERFIRALALPEVQTHMKDLKERFAGRKVIMGVDRLDMIKGIPQKILAFEKFLEENSHWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNKVAVDCYSKSNNRLIILGFNATLTEPVDPFGRGGQIKELELKVHPDMKEPLKKLSDDPKTTVVVLSGSGRAVLDKNFGEYNMWLAAENGMFLRLTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSNFELRETSVIWNYKYADVEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAVGVSKGAAIDRILGEIVHSKGMKEPIDYVLCIGHFLAKDEDVYKFFEPELPSEVSPMAKAMRSNSCRPSSLPRFSSGKNGPKASQYKKQRSLSNIDRREVDPASGDPWRPTGRDRTSLHEGSSVLDLKGDNYFSCSVARKRSSARYLLKTSQDIVNLLSDLADRSSSPST* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2981 915 MobiDBLite consensus disorder prediction 23 46 - -
Mtr8g2981 915 Gene3D Glycogen Phosphorylase B; 324 526 - -
Mtr8g2981 915 CDD HAD_TPP 575 794 - -
Mtr8g2981 915 Pfam Glycosyltransferase family 20 77 542 IPR001830 GO:0003824|GO:0005992
Mtr8g2981 915 Gene3D - 602 760 IPR023214 -
Mtr8g2981 915 Gene3D - 666 746 - -
Mtr8g2981 915 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 62 905 IPR001830 GO:0003824|GO:0005992
Mtr8g2981 915 CDD GT20_TPS 77 542 IPR001830 GO:0003824|GO:0005992
Mtr8g2981 915 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 77 542 IPR012766 GO:0003825|GO:0005992
Mtr8g2981 915 MobiDBLite consensus disorder prediction 23 47 - -
Mtr8g2981 915 MobiDBLite consensus disorder prediction 802 865 - -
Mtr8g2981 915 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 545 - -
Mtr8g2981 915 Pfam Trehalose-phosphatase 601 800 IPR003337 GO:0003824|GO:0005992
Mtr8g2981 915 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 62 905 - -
Mtr8g2981 915 MobiDBLite consensus disorder prediction 803 835 - -
Mtr8g2981 915 Gene3D Glycogen Phosphorylase B; 69 323 - -
Mtr8g2981 915 SUPERFAMILY HAD-like 575 762 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2981 Mtr-Chr8 40453027 40462964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2981 1 913 Trehalose Biosynthesis Gene Families AT1G78580 73.291 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2981 K16055 - gmx:100816642 1570.83