Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2961 ATGAAGTGGAGTGGAAGAAAACCTTCTTCAGCTTCTTCTTCAAAACCTTCCTTCATCTCTCATGTATCCTCTTTTTCATGGCTGTTAAAGTTCAAGCAAATGAAAATCAACTCAGACTCAGAAGCAAAATCCGAAAAGCTGATGCAGAACTCCCCGTCTGATGGTTCATCACAATTTCCTTGTGGGAATAGAGGCAGGTTTTATGGAGGTAATGATGATGCATTCTGGAGATTGTCATTTGGTGAAGAGTTTACTAATGACCAAAAGAAGAAAAGTAAAGATATTCTGAAGCCAGTAATGTACAGTTTGGATGCAAGAAGACATGGAAGAAGAAGAGGAAGAGAAGATAGAAAATTGCTTAATGAAACAAAGAGTGCAAAGGAAGTTGAATGCTTAAAGAGGAGATATGAGAGGAAAGCACAAAGAGTTTTACAAGAGCAGCTCTTGAAATTACAGAATGCAGCAGAGGAAGCTGAATTTGAATCACCAAGAACCCAATTATTTTCCTCTTATGTAGATGCAGAAAGTTCTGGTCTTGGATTTAAAAGTGAGGAGTTTAAAGCAAAGGTTAACAAAAGGAGGGAATCAGTTCATGTGAGCAGAGAGCTGCAGAGGAGGAAACCAAAGCAGAGTTCCAAGGTAAGAGTACATTCTCCAAAGATGGCTACTAAGGTTGAAATACGCAAAATAAAGGCGATAGAAGACAAAAAGAAAGCAAAACTAAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAACAGACGAAGGGTTAGATAGTTTTGCTGTTGTCAAGTGTTCTTTGGATCCACAACAAGATTTTAGAGATTCAATGATTGAGATGATCAAAGAGAAACATATCAGTCAGCCAGAAGAAATGGAAGAGTTATTAGCGTGTTATTTGAGTTTGAATTCCAATGAATTCCATGATATCATTATCAAAGCGTTTCGACAGGTATGGTTATGCATGAGCCAATCAAGTTTGTGTAATAAATCAGACAAACAATGTTGTTACTATGATTAG 1020 0.3725 MKWSGRKPSSASSSKPSFISHVSSFSWLLKFKQMKINSDSEAKSEKLMQNSPSDGSSQFPCGNRGRFYGGNDDAFWRLSFGEEFTNDQKKKSKDILKPVMYSLDARRHGRRRGREDRKLLNETKSAKEVECLKRRYERKAQRVLQEQLLKLQNAAEEAEFESPRTQLFSSYVDAESSGLGFKSEEFKAKVNKRRESVHVSRELQRRKPKQSSKVRVHSPKMATKVEIRKIKAIEDKKKAKLKMKKEEEIVEETDEGLDSFAVVKCSLDPQQDFRDSMIEMIKEKHISQPEEMEELLACYLSLNSNEFHDIIIKAFRQVWLCMSQSSLCNKSDKQCCYYD* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2961 339 Coils Coil 126 161 - -
Mtr8g2961 339 MobiDBLite consensus disorder prediction 197 218 - -
Mtr8g2961 339 MobiDBLite consensus disorder prediction 39 63 - -
Mtr8g2961 339 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 334 IPR038933 GO:0045892
Mtr8g2961 339 ProSiteProfiles OVATE domain profile. 262 321 IPR006458 -
Mtr8g2961 339 MobiDBLite consensus disorder prediction 43 60 - -
Mtr8g2961 339 PANTHER TRANSCRIPTION REPRESSOR OFP4 9 334 - -
Mtr8g2961 339 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 261 322 IPR006458 -
Mtr8g2961 339 Pfam Transcriptional repressor, ovate 266 322 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2961 Mtr-Chr8 40248238 40250326 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr8g2961 Ovate 8.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2961 - - mtr:MTR_8g087530 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2961 8 40248238 40250326 Mtr2g0536 2 5336959 5338029 PCT