Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2955 ATGGGAAGCCAAGATGTGAAGTTGGTAGGCTTTTGGGTGAGTCCATTTGTTAAGAGGGTTGAGTGGGCCTTGAAGCTCAAGGGTGTAAATTATGAGTATGTAGAAGAAGATATCTTCAACAAAACTCCTCTCCTTTTGGAATTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTTCATGCTCAGAAACCAATTGCAGAGTCATTCATTATCCTTGAGTACATTGATGAAACATGGAAGCAATCTCCACTTTTGCCTCAACATCCATATGAAAGAGCTCTTGCTCGTTTTTGGGCTGATTTTGCTGAACAAAAGCTTTTGAATGCAGCATGGATAGCAATGTGTAACAGTGGAGAAGAACAGGAAAAGGCTTTGAAGGTAGCTAGAGAAGCAATAGAGAAGATAGAAGAGGAGATAAAGGGGAAGAAATTCTTTGGAGGGGACAATATTGGGTACCTTGATCTTGCTCTTGGATGGATTTCTTACTGGCTTCCTGTGTTTGAGGAAGTTGGGTCTATGCAGATAATAGACCCATTGAAATGTTCAGCCATCACTGCATGGATGACCAATTTTCTAAACCAGCCTGTGATCAACGACAGCTTGCCCCCAAGAGACAAGATGCTTGTTTACTTCCAATCTCGCAGAGAGGCATTTCATGGCTTGTTCAAGATTTAG 675 0.4222 MGSQDVKLVGFWVSPFVKRVEWALKLKGVNYEYVEEDIFNKTPLLLELNPVHKKVPVLVHAQKPIAESFIILEYIDETWKQSPLLPQHPYERALARFWADFAEQKLLNAAWIAMCNSGEEQEKALKVAREAIEKIEEEIKGKKFFGGDNIGYLDLALGWISYWLPVFEEVGSMQIIDPLKCSAITAWMTNFLNQPVINDSLPPRDKMLVYFQSRREAFHGLFKI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2955 224 Gene3D - 85 220 - -
Mtr8g2955 224 Coils Coil 118 138 - -
Mtr8g2955 224 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Mtr8g2955 224 PANTHER GLUTATHIONE S-TRANSFERASE 1 218 - -
Mtr8g2955 224 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Mtr8g2955 224 Pfam Glutathione S-transferase, C-terminal domain 109 195 IPR004046 -
Mtr8g2955 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Mtr8g2955 224 Gene3D Glutaredoxin 1 84 - -
Mtr8g2955 224 CDD GST_N_Tau 6 79 - -
Mtr8g2955 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Mtr8g2955 224 SFLD Main (cytGST) 2 218 - -
Mtr8g2955 224 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Mtr8g2955 224 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Mtr8g2955 224 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Mtr8g2955 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 218 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2955 Mtr-Chr8 40212710 40214062 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2955 2 219 Glutathione S-transferase Gene Family AT2G29420 44.037 3.31e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2955 K00799 - gmx:547583 345.51