Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2954 ATGTTTCATGAAAGAGAATTCATCTCTATTATCATTCTCTTCATGATAGCCTTTTGTTTCTTACCATCCTCAACAGCTGACACAGATGCTCAAATTCTAGTGAACTTCAAAAGCTTCTTATCCAATGCAGATGCTTTAAACAATTGGAGTAACGATTCTATTAATGTGTGCACATGGACTGGTTTAATATGCATCAATCAAACTATACTTCATGGTTTGAGACTAGAAAATATGGGACTAAGTGGAACAATTAATGTTGACATCCTTATGAAATTGTCCAATTTGAAGAGTTTTAGTGTTATTAACAATAATTTTGAGGGTACAATGCCTTCATTCAATAAAATTGTGGGATTAAGGGCATTGTTTCTGACCAAAAATAAATTCTCTGGTGAAATTCCTGATGATGCTTTTGAAGGGTTAAGATGGCTCAAGAGAGTATTCTTAGCAGAAAATGGATTTAAGGGTCATATTCCTAAATCCCTTGCTCAATTGCCTAGACTTTATGATATTGATTTACATGGAAATAGCTTTGATGGCAATATACCAGATTTTCTACAGAGTGGTTTCAGAGTGTTTAATTTATCTAACAATCAATTGGAGGGTGCAATACCAGAAGGTTTGAGAAATGAGGATCCAAGTGTTTTTGCAGGCAACAAAGGTCTGTGCGGAAAACCTCTTGAACAGCCCTGCAGCGAAAGCCATAGTGCTCCGCGTGAAGAAGAAAACGAAAAAGAACCTAAGAAACGCCATGTTCTTATTAGTATTATTGCATTTGTGGTAGTGCTTATATTGGCTTCAATACTGGCACTTTTGTTCATTCGATACCGTAGAAAGAAAGCTGCAGAAAAATCAATTTGGAATATGGAGAATGCACAATCACAGTCTCATAACACCAACACCAGTACAGCTTCCACGAGTGAGGCCAAATCAATTGTAGTTGAATCCAAGAAAAACAAAGATGAAGATTTGAACTTCGTTACGAACGAAAGGGTTGAGTTTGATTTGCAGGACTTGTTAAGGGCCTCAGCAGAGGTTTTGGGAAGTGGAAGTTTTGGATCCACTTACAAGGCTATGGTATTGACAGGACCAGTTGTTGTAGTGAAAAGATTTAAGCACATGAACAAAGTTGGCAAAAAAGAGTTCTATGATCATATGAGAAGGCTTGGAAGGTTGACACATCCTAATCTACTCCCTCTAGTTGCATTCTATTATGGAAAAGATGAGAAGCTTTTGATACACGATTTTGCAGAAAATGGCAGCTTGGCAAGTCATCTTCACGGTAGACATTGTGAGTTGGATTGGGCAACACGTTTGAAGATAATCAAAGGAGTAGCTAGAGGTTTAGCTTACCTTTACAGAGAATTTCCGGACGAAAAGTTACCACATGGACATCTAAAATCATCGAATGTTGTGTTAGACCATTCATTTGAGCCTTTTTTAACTGAGTATGGACTTGTGGAAGTAACTGACTTGAACCATGCTCAACAGTTCATGGTAGGCTACAAGTCCCCAGAGGTGAGTCAACATGAAGGGCCGAGCGAGAAGAGCGACGTATGGTGTTTAGGGATACTTATATTGGAGCTATTGACAGGGAAGTTCCCTGCAAATTATTTGAGGCATGGGAAGGGAGCAAATGAAGATTTAGCAATGTGGGTGGAATCTATAGTGAGGGATGGGTGGAGTGGAGAAGTGTTGGATAAAAGCATAGGTGGTGGGAGTAGAGGTGAAGAAGGTGAGATGTTGAAGCTGTTGAGGATTGGAATGAGTTGTTGTGAATGGAGTTTGGAGAATAGGTTGGGTTGGAAGGAGGCAGTGGCAAAGATTGAGGAGTTGAAGGAAATGGATCATGTGGGGGTTGGAGGAGGAGTTCAGAGTCAAGACTCTGACTTGTCTCTTTGA 1899 0.3949 MFHEREFISIIILFMIAFCFLPSSTADTDAQILVNFKSFLSNADALNNWSNDSINVCTWTGLICINQTILHGLRLENMGLSGTINVDILMKLSNLKSFSVINNNFEGTMPSFNKIVGLRALFLTKNKFSGEIPDDAFEGLRWLKRVFLAENGFKGHIPKSLAQLPRLYDIDLHGNSFDGNIPDFLQSGFRVFNLSNNQLEGAIPEGLRNEDPSVFAGNKGLCGKPLEQPCSESHSAPREEENEKEPKKRHVLISIIAFVVVLILASILALLFIRYRRKKAAEKSIWNMENAQSQSHNTNTSTASTSEAKSIVVESKKNKDEDLNFVTNERVEFDLQDLLRASAEVLGSGSFGSTYKAMVLTGPVVVVKRFKHMNKVGKKEFYDHMRRLGRLTHPNLLPLVAFYYGKDEKLLIHDFAENGSLASHLHGRHCELDWATRLKIIKGVARGLAYLYREFPDEKLPHGHLKSSNVVLDHSFEPFLTEYGLVEVTDLNHAQQFMVGYKSPEVSQHEGPSEKSDVWCLGILILELLTGKFPANYLRHGKGANEDLAMWVESIVRDGWSGEVLDKSIGGGSRGEEGEMLKLLRIGMSCCEWSLENRLGWKEAVAKIEELKEMDHVGVGGGVQSQDSDLSL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2954 632 MobiDBLite consensus disorder prediction 226 245 - -
Mtr8g2954 632 Gene3D Ribonuclease Inhibitor 189 230 IPR032675 -
Mtr8g2954 632 PANTHER LRR RECEPTOR-LIKE KINASE 11 617 - -
Mtr8g2954 632 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Mtr8g2954 632 ProSiteProfiles Protein kinase domain profile. 340 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2954 632 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Mtr8g2954 632 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 617 - -
Mtr8g2954 632 Pfam Protein kinase domain 343 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2954 632 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Mtr8g2954 632 MobiDBLite consensus disorder prediction 289 308 - -
Mtr8g2954 632 Gene3D Phosphorylase Kinase; domain 1 304 415 - -
Mtr8g2954 632 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Mtr8g2954 632 SUPERFAMILY Protein kinase-like (PK-like) 344 610 IPR011009 -
Mtr8g2954 632 SUPERFAMILY L domain-like 34 209 - -
Mtr8g2954 632 Gene3D Transferase(Phosphotransferase) domain 1 416 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2954 Mtr-Chr8 40202972 40205485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2954 1 625 Receptor kinase-like Gene Family AT4G31250 44.311 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr8g2954 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2954 - - gmx:100803999 820.076