Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2948 ATGAAAAGAAAATTCAAAAACCCACATACTCACCAAGAGGAAGACTTGACTGACATATCTCAAGATTCCACTCCTTCTTCCACCTCATTTAACATCGATGGCTCAGTCACTTCCCACTCTTCTTCATCATCTAAGAAAAGCAGGCGAGCCATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAACCTCATGGATCAAGGCTAAAAGGAGAGAGTAATACACCACCTTCAGATTCATGGGCATGGAGAAAATATGGCCAGAAACCCATCAAAGGTTCGCCTTATCCCAGAGCGTACTACAGGTGTAGCAGTTGCAAAGGTTGTCCAGCAAGGAAACAAGTAGAAAGAAGCCGTGTGGACCCCACAATGCTCATCATAACCTACTCCTCCGACCACAACCATGCATGGCCAGTTTCAAAAACTACAACAAGACTCTCCCTCAAGAAAACCGAACCAGACCCGGTTGAACCGGATGAGAAATTTGCAGGTCACTTGGTCTTGGACGACGAGTTAGGCTGGTTGGGAGAGATAGACACAAATTCATCAGCTATTCTGGAGAGTCCAATAATGGCGGAGTTTGATAATGACATGGCGTCCGTGTTTTTGCCGATGGAGGAAGAAGATGAGTTGCTTTTTGCTGACCTTGGAGAGTTGCCGGAGTGTTCCACGGTGTTCCGGCATGGGTTGTTGGATGCACGACGGCGGTTAACAGCTCCGTGGTGTGGGACCACCACTTGA 738 0.4743 MKRKFKNPHTHQEEDLTDISQDSTPSSTSFNIDGSVTSHSSSSSKKSRRAIQKRVVQIPIKEPHGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSCKGCPARKQVERSRVDPTMLIITYSSDHNHAWPVSKTTTRLSLKKTEPDPVEPDEKFAGHLVLDDELGWLGEIDTNSSAILESPIMAEFDNDMASVFLPMEEEDELLFADLGELPECSTVFRHGLLDARRRLTAPWCGTTT* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2948 245 MobiDBLite consensus disorder prediction 1 83 - -
Mtr8g2948 245 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g2948 245 Gene3D WRKY domain 66 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g2948 245 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 243 IPR044810 GO:0003700
Mtr8g2948 245 PANTHER OS01G0750100 PROTEIN 17 243 - -
Mtr8g2948 245 MobiDBLite consensus disorder prediction 19 45 - -
Mtr8g2948 245 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g2948 245 SUPERFAMILY WRKY DNA-binding domain 74 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g2948 245 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2948 Mtr-Chr8 40143399 40145186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2948 1 227 WRKY Transcription Factor Family AT1G29280 51.779 1.98e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g2948 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2948 - - cam:101493438 348.977