Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2934 ATGAAACCTTTTTACAGATTCTTGATTCTCCTAACCTTCTTCTCTATAGTAGAATCTTCATGCAACAGTAAACACCAAATCTTGTTAATTTCAAAAGCTTTCAAATTTGTTTCTGGCTTCAACTCTTCCACCTTATTCCAAACAAGAATTTCAAACTCTCATATCACCAAAATAGTTCTTCCCTCCAAAAATCTAACCGGAACAATTTCATGGGGTTATCTCAAAAACATCTCAAACTTACAAATTCTTGATCTCTCTGGAAATTCTCTACAAGGCCATGTACCAAGCTGGTTTTGGTCTAGTTTTTCATCCTTATTAGAAATAAACCTCTCAAGAAACAAATTCGGAGGAAGCATCACCATTGAGTTGAACAATAAAACCTCAACCATTCAAAACCTTAATCTCTCACACAACAGGTTCACCAACGTTGCTCAACTCTCTAGCTTCCAAAACCTTAAAATCCTCGACCTTTCTCACAACAACTTAAGAGCACTTCCCTTAGGTTTTCAAAACCTTACCAAACTACAACACCTTGATCTTTCAAGCTGCAATCTCAAAGATAACATAAAACCCATTTCTTCTTTACACAATCTTCACTACTTAGATTTATCAAACAACACTTTAACTGGTAATTTCCCTTCTGATTTTCCTCCACTTCACAATCTTAAATTTCTCAACATTTCACAAAACAACTTCACCTATCACAATACAAAACAAAACATCATTCATAGAAAACAAACCAAACCAACATCCAAAACATTGATACTTATAGTGTGTTCTGTATCATCAACAGTATTTGTTATAGCTATTATTTCCATTTGGGTCATCTTTATTATAAACAAAAAGATGAAACAACGTTCCAAGATGAAGAAATGGGCTATCTCATTACCAGTTATGATGAACAAAACAAACACAAAGGTAGAGAAAACAGGACCATTTGAGTTTGAAACAGAATCAGGAACAACATGGGTTGCAGATGTGAAAGAACCAACATCTGCAGCAGTGGTGATGTTTGAGAAACCATTGATGAACTTCACATTCAAAGATCTCATCATTGCCACGTCACATTTCGGGAAAGAGTCACAGCTAGCAGAAGGAAGGTGTGGACCAGTGTATTGGGCCGTGTTGCCCGGTGAAATACACGTGGCAATCAAGGTTCTTGAACATGTCAGAGACGTTGATTATGATGACTCTGTGGCTATGTTTGTTGACTTATCGAAACTGAAACATCCAAACTTGTTGCCTCTTTCTGGTTACTGTATTGCAGGAAAAGAGAAGCTAGTGTTATACGAGTTTATGGCAAACGGTGACTTAGGTAGATGGCTACACGAGCTTCCAACTGGGGATACCAACATCGAGGATTGGACAGGTGACACGTGGGAGTTCCAAAATAGCGTCGTCGAATCATCCTCGGAGAAGATGGGTTGGCTAACACGCCACCGTATCGCGGTAGGGATAGCACGTGGCCTCGCATATCTCCACCATGCAGGTTCCAAACCGGTTGTACACGGCCACCTTGTCACCTCCAACATTTTACTCACCGATAATTTTGAGCCGCGAATATCTGATTTTGGATTGCGGATCCACTCGAGTCTTAATGGTGGCACTGAGGATGATGTGTTCTGCTTTGGCGTGGTGTTGATGGAACTTCTAACTGGGAGGATTGGCACAATGACAACAATCATTGCGGTTAGAAAGGCAGCGAGAGAGGGACAACATGTTAGAGTCCTTGATGAGAGGTTGCTACTTGGAGGTGATTCAGCCGTGAGCGAGATGGTGGAGAGCCTCGTAGTCGCTGTCTTGTGCATGGCTGAATCACCTTCTAAGAGACCTACCATGCAACAGGTTTTAGGCTTACTCAAAGATATTCATACTCATTAA 1881 0.4035 MKPFYRFLILLTFFSIVESSCNSKHQILLISKAFKFVSGFNSSTLFQTRISNSHITKIVLPSKNLTGTISWGYLKNISNLQILDLSGNSLQGHVPSWFWSSFSSLLEINLSRNKFGGSITIELNNKTSTIQNLNLSHNRFTNVAQLSSFQNLKILDLSHNNLRALPLGFQNLTKLQHLDLSSCNLKDNIKPISSLHNLHYLDLSNNTLTGNFPSDFPPLHNLKFLNISQNNFTYHNTKQNIIHRKQTKPTSKTLILIVCSVSSTVFVIAIISIWVIFIINKKMKQRSKMKKWAISLPVMMNKTNTKVEKTGPFEFETESGTTWVADVKEPTSAAVVMFEKPLMNFTFKDLIIATSHFGKESQLAEGRCGPVYWAVLPGEIHVAIKVLEHVRDVDYDDSVAMFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNIEDWTGDTWEFQNSVVESSSEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLTDNFEPRISDFGLRIHSSLNGGTEDDVFCFGVVLMELLTGRIGTMTTIIAVRKAAREGQHVRVLDERLLLGGDSAVSEMVESLVVAVLCMAESPSKRPTMQQVLGLLKDIHTH* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2934 626 Gene3D Transferase(Phosphotransferase) domain 1 531 626 - -
Mtr8g2934 626 Gene3D Transferase(Phosphotransferase) domain 1 433 530 - -
Mtr8g2934 626 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515
Mtr8g2934 626 Gene3D Ribonuclease Inhibitor 126 247 IPR032675 -
Mtr8g2934 626 Pfam Protein tyrosine and serine/threonine kinase 360 527 IPR001245 GO:0004672|GO:0006468
Mtr8g2934 626 ProSiteProfiles Protein kinase domain profile. 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2934 626 PANTHER KINASE, PUTATIVE-RELATED 236 625 - -
Mtr8g2934 626 PANTHER KINASE, PUTATIVE-RELATED 3 241 - -
Mtr8g2934 626 Pfam Leucine rich repeat 129 185 IPR001611 GO:0005515
Mtr8g2934 626 Gene3D Ribonuclease Inhibitor 25 125 IPR032675 -
Mtr8g2934 626 Gene3D Phosphorylase Kinase; domain 1 317 432 - -
Mtr8g2934 626 SMART LRR_typ_2 195 218 IPR003591 -
Mtr8g2934 626 SMART LRR_typ_2 77 100 IPR003591 -
Mtr8g2934 626 SMART LRR_typ_2 149 171 IPR003591 -
Mtr8g2934 626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 236 625 - -
Mtr8g2934 626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 241 - -
Mtr8g2934 626 Pfam Leucine Rich Repeat 79 98 IPR001611 GO:0005515
Mtr8g2934 626 Pfam Leucine Rich Repeat 197 216 IPR001611 GO:0005515
Mtr8g2934 626 PRINTS Leucine-rich repeat signature 152 165 - -
Mtr8g2934 626 PRINTS Leucine-rich repeat signature 195 208 - -
Mtr8g2934 626 SUPERFAMILY Protein kinase-like (PK-like) 336 620 IPR011009 -
Mtr8g2934 626 ProSiteProfiles Leucine-rich repeat profile. 129 150 IPR001611 GO:0005515
Mtr8g2934 626 SUPERFAMILY L domain-like 48 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2934 Mtr-Chr8 39960469 39963339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2934 55 623 Receptor kinase-like Gene Family AT5G07280 30.880 1.64e-68 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mtr8g2934 PK_Tyr_Ser-Thr 8.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2934 - - gmx:100788556 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2934 8 39960469 39963339 Mtr2g0507 2 5022226 5026251 PCT