Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2931 ATGAATATGTCAGATGGATATGAGAAACAAGAGAATGAGAGGAGTACTGGGAAGAGTGAAGAACATGGTGAGGACACTTCAATGGGATCTTCATCACATAATAAGTGTTCAATATCCTTTGATTTGAATGAAGAAGCTAGTCGTAGTGATCAAGATGTTAACAATGAGGAGAATGATGAGGCATGTGATCATGAATTAGTCAATAATGGTGATGATGATGATGAGAAATTAGCAAAGGATGATGATGAAGGTAGTTCAAGTTCAACAAAAAGAAGTAGTGGATCAAATGAAAGAAGAAGAAATGGTGTAAGACAATATGTTAGATCAAAGATGCCTAGGCTTCGGTGGACTCCTGATCTTCATCACTCCTTTATGCATGCTGTTGAAAGGCTTGGAGGCCAAGAGAGAGCAACACCCAAATTGGTGCTTCAACTGATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCATTTGCAGATGTACCGGAGCAAGAAACTTGACGAGGCTGGACAAGTACTAAGTCCAACACACAGATCAACCCATGAATTAGGTTCCATTTCTCACCATGTAGCCCATCAATCCATGATACCTCATCAACATTTCAAGATGGCAAATGGTGGAATTGTTCTAGAAACTAATTACAACCAGCACAGTTATAATTTCCACAGTCTCCTGCATCCCTCATCCTTATCACATTCACATTCACATTCACATTCAAAGCCCATCAATTCAAGGCACCAAGAATGGTACTTAAATCATCAATCTTGGAGACCAAGCTACATGAGCAATGAACTAGTTATGCCATCAACAACCTTAAATACACAAGGAAGATCATCCATAACTTTGAATCAGCAGCTTCAAGTTAAAGATAATACGGTCACTACCACACTTGCTCCTATGAGACCAAGCCAATTTCTTGAAGAGAAAAGATGGCCTCCCTTAGATATCATGAACAATCATCCATATTGGAAGAAAAATTTACATGATCATTTTTCTAGTGATAGAACATCACTTAGACCCGCTGAGGTGAGCTTTGGAAACAACACAAGAAGCAGGGAAAACATATCAAACATCAATAATGACCACAACTATTTTAATAGTTCAAAGATTGAATTTGATCCCCCGTTTCGGATTAAGTTGAATCAAGAGACATTGCTGAAAGACAAACAATGGGTGCCTGATTTGCAACTGAGCTTAAGTCAAACAAACGGCAACAATGATGGCAAGAGTGATGGTTTGAGAGAAACCAAAGAAATCGACACGAAACTCTCACTTTCTTAG 1287 0.3893 MNMSDGYEKQENERSTGKSEEHGEDTSMGSSSHNKCSISFDLNEEASRSDQDVNNEENDEACDHELVNNGDDDDEKLAKDDDEGSSSSTKRSSGSNERRRNGVRQYVRSKMPRLRWTPDLHHSFMHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSPTHRSTHELGSISHHVAHQSMIPHQHFKMANGGIVLETNYNQHSYNFHSLLHPSSLSHSHSHSHSKPINSRHQEWYLNHQSWRPSYMSNELVMPSTTLNTQGRSSITLNQQLQVKDNTVTTTLAPMRPSQFLEEKRWPPLDIMNNHPYWKKNLHDHFSSDRTSLRPAEVSFGNNTRSRENISNINNDHNYFNSSKIEFDPPFRIKLNQETLLKDKQWVPDLQLSLSQTNGNNDGKSDGLRETKEIDTKLSLS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2931 428 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 428 IPR044848 GO:0003700
Mtr8g2931 428 MobiDBLite consensus disorder prediction 1 107 - -
Mtr8g2931 428 MobiDBLite consensus disorder prediction 29 44 - -
Mtr8g2931 428 MobiDBLite consensus disorder prediction 7 28 - -
Mtr8g2931 428 Gene3D - 111 168 - -
Mtr8g2931 428 MobiDBLite consensus disorder prediction 45 104 - -
Mtr8g2931 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 168 IPR017930 -
Mtr8g2931 428 MobiDBLite consensus disorder prediction 412 428 - -
Mtr8g2931 428 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 3 428 - -
Mtr8g2931 428 MobiDBLite consensus disorder prediction 400 428 - -
Mtr8g2931 428 SUPERFAMILY Homeodomain-like 110 166 IPR009057 -
Mtr8g2931 428 Pfam Myb-like DNA-binding domain 114 164 IPR001005 -
Mtr8g2931 428 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 112 167 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2931 Mtr-Chr8 39925563 39930715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2931 101 169 G2-like Transcription Factor Family AT2G42660 79.710 3.28e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr8g2931 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2931 - - mtr:MTR_8g086410 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2931 8 39925563 39930715 Mtr2g0500 2 4940249 4945028 PCT