Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2930 ATGGAATGCATATGGGATCGGTTTGGATTATGGCTCAGAATTTATATTGGATTGATTTGTATCTGGGGAATTCGACTGTGCTGGTCTCTGAATGATGAAGGAATTGCTTTGTGGGAATTTCGGGTAAGAATAATTTCTGATCCGTATGGTGCTCTACTAAATTGGAATCCAAATGATTCCAACCCTTGCAAGTGGATGGGAGTTCATTGTGTTGATGGTAAAGTGCAAATCCTGGACCTAAATGGCCAATCATTGGAAGGGACATTGACTCCTCATCTTGGGAAACTTAATCACTTAAAATCTCTTGTGTTATGCAAGAACAATTTTTCTGGCACCATTCCCAAGGAACTTGGAGATCTAGACAATTTGAAGTTGTTGGATTTAAGGGAGAATAATTTGACAGGAAATATCCCTGCGGAAATTGGCAGGATGTTGTTGTTAAAGCAATTGTTGGTTCATGACAATAAAATTGAAGGTGGCGGTTCTCAAGAGCTCGGGAACATGGAATTGCCTTCCAAATCACTATTTAGTGACAACTATTCGTCACCTCTGACAAGTTTATTTCAGTGCAAAAATAGAAAGTTTGCACATTGCATCTGGTATAGAGATCTCAAGCAATGGAACGAGGAAAAATCTTTGGCTGTTCCAATTAAAGGAGCACTTAAAAGATATCTTAAGGCCATGGTGCTGCAACTGTTCAAGCTTGGAAAGGCCGCTTCTCATGGCTATGAGGAGAATTACTGGGGCAATCTTCCTAGTTCTGACGAGTCGGAGTTTGGTCCAGATGTATCAAATCTAATCAGTTCTGCACGTCGTAAGTTGCTTGATCAGTCCAATAACCTTGCAGCTGCACCTTATAGCGGTGGACCTACTATACAGATCAGTGTTATTCCAATTTCAATAAGTAGTGGATCTTTCCCGGCTGTGCCAGATGCCAATAAGAAACAAAATCAATCTTCTGCACCACTGCATTCAGCTACCGGTTTTCCACATGATAATCAAACAAGTCAGCCAAATTCAGCTAATGGTGCTCCAAGTAAACTCTGGAAATATATTATTATTTTCTTCGGTGTGGTTTTCTTGGCCATTTTTACCGTGATCATGTTTTGCATTTTGCGAAAACGAGCTGCAAAAGTAATAAAGCCATGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTGTAACAGGGGTCCCCAAGTTAAATCGAGCAGAGTTGGAGACAGCCTGTGAAGATTTCAGCAATATCATTAACAGTTTTGAAAAATGCACCATATATAAAGGAACACTGTCCAGTGGAGTTGAGATTGCTGTTGATTCTACTGTTGTTACTTCTTCCGAAGATTGGTCAAAGAACATGGAGATGGCCTATAGGAGAAAGATTGCTTCTCTGTCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGTTACTGTGACGAAGAAGAACCATTCACAAGGATGATGGTGTTGGAGTATGCTCCAAATGGAAGCTTATTCGAGCATCTACATGTTAAGGAAATTGAACATCTTGATTGGATGGCAAGGATGAGGGTTATCATGGGAACAGCTTATTGTCTTCAGTACATGCACCATGATCTGAATCCACCAGTCTCTCATTCCAACCTTAATTCAGTTGCAATATTATTAACAGATGACTTTGCTGCTAAGGTATCAGAGATCAGTTTTGGCAGTAACGGATTATCACCAGCCAGCACAGTTGGCGATGAATCAAAGAAATCTGAGTTGCCACCCCACCAAGGTCCTGAAACCGATGTTTATAACTTTGGAATATTATTGCTTGAAATCATTTCTGGAAAACTACCGTACTCTGAAGAACAAGGTCTCCTTGTGAACTGGGCTGCTGAGCACTTGAATGATAAGCGAAACATTGGCTGTTTGATCGATCCTACGCTCGAGTCCTTCAAAGACAACGAACTTGATGTAATATGTGAGGTGATAAAAGAATGTGTTCAATCTGATCAGAGGTTAAGGCCAACAATGAAAGAAGTAACTCACAAATTGAGGGAAGTGCTTTCTATATCACCTGATCAAGCAGTACCAAGACTTTCTCCACTCTGGTGGGCTGAACTCGAGATCTTGTCGGTGGAGGCCACTTAG 2124 0.4082 MECIWDRFGLWLRIYIGLICIWGIRLCWSLNDEGIALWEFRVRIISDPYGALLNWNPNDSNPCKWMGVHCVDGKVQILDLNGQSLEGTLTPHLGKLNHLKSLVLCKNNFSGTIPKELGDLDNLKLLDLRENNLTGNIPAEIGRMLLLKQLLVHDNKIEGGGSQELGNMELPSKSLFSDNYSSPLTSLFQCKNRKFAHCIWYRDLKQWNEEKSLAVPIKGALKRYLKAMVLQLFKLGKAASHGYEENYWGNLPSSDESEFGPDVSNLISSARRKLLDQSNNLAAAPYSGGPTIQISVIPISISSGSFPAVPDANKKQNQSSAPLHSATGFPHDNQTSQPNSANGAPSKLWKYIIIFFGVVFLAIFTVIMFCILRKRAAKVIKPWKTGISGQLQKAFVTGVPKLNRAELETACEDFSNIINSFEKCTIYKGTLSSGVEIAVDSTVVTSSEDWSKNMEMAYRRKIASLSRVNHKNFTNLIGYCDEEEPFTRMMVLEYAPNGSLFEHLHVKEIEHLDWMARMRVIMGTAYCLQYMHHDLNPPVSHSNLNSVAILLTDDFAAKVSEISFGSNGLSPASTVGDESKKSELPPHQGPETDVYNFGILLLEIISGKLPYSEEQGLLVNWAAEHLNDKRNIGCLIDPTLESFKDNELDVICEVIKECVQSDQRLRPTMKEVTHKLREVLSISPDQAVPRLSPLWWAELEILSVEAT* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2930 707 SUPERFAMILY Protein kinase-like (PK-like) 400 676 IPR011009 -
Mtr8g2930 707 Gene3D Ribonuclease Inhibitor 29 221 IPR032675 -
Mtr8g2930 707 SUPERFAMILY L domain-like 42 169 - -
Mtr8g2930 707 MobiDBLite consensus disorder prediction 310 341 - -
Mtr8g2930 707 SMART serkin_6 349 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2930 707 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mtr8g2930 707 Gene3D Phosphorylase Kinase; domain 1 381 494 - -
Mtr8g2930 707 Gene3D Transferase(Phosphotransferase) domain 1 495 687 - -
Mtr8g2930 707 Pfam Protein tyrosine and serine/threonine kinase 424 676 IPR001245 GO:0004672|GO:0006468
Mtr8g2930 707 PANTHER PROTEIN MALE DISCOVERER 2 1 707 - -
Mtr8g2930 707 PANTHER LRR RECEPTOR-LIKE KINASE 1 707 - -
Mtr8g2930 707 MobiDBLite consensus disorder prediction 568 590 - -
Mtr8g2930 707 ProSiteProfiles Protein kinase domain profile. 377 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2930 Mtr-Chr8 39909992 39915700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2930 85 687 Receptor kinase-like Gene Family AT5G56040 26.646 3.98e-46 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mtr8g2930 PK_Tyr_Ser-Thr 1.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2930 - - gmx:100808098 1022.31