Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2929 ATGGCAGTTGTAGCTGCTCCCAAGAAGAACAACTCAATGAACAAGAAAGATAATCCAAATCTTCTATTGGGACGTTTTGAATTAGGAAAACTTCTTGGCCATGGAACCTTTGCAAAAGTCCACCTTGCCAAGAACCTCAAAACAGGTGAATCCGTAGCTATAAAGATCATAAGTAAAGATAAAATCCTTAAAAGTGGTTTAGTTTCACATATCAAACGAGAAATCTCCATTCTGCGCCGTGTTCGTCACCCCAACATTGTTCAACTCTTTGAAGTCATGGCTACAAAGACAAAGATTTACTTTGTGATGGAATATGTACGAGGTGGTGAGCTTTTCAACAAGGTTGCTAAAGGTAGGTTGAAAGAAGAAGTTGCAAGGAAATATTTTCAGCAGTTAATATGTGCTGTTGGATTTTGTCATGCTAGAGGTGTTTTTCATAGAGATCTAAAGCCTGAAAATTTGTTGCTTGATGAAAAAGGTAACCTTAAAGTTTCAGATTTTGGTCTTAGTGCTGTGTCGGATGAAATTAAGCAAGATGGGTTGTTTCATACTTTTTGTGGTACACCTGCTTATGTTGCTCCTGAGGTTTTGTCTAGGAAAGGTTATGATGGTGCTAAGGTTGATATTTGGTCTTGTGGGGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTACCTTTTCATGATCCTAATAATGTTATGGCTATGTATAAGAAGATTTATAAAGGTGAATTTAGGTGTCCTAGATGGTTTTCACCAGAACTTGTTAGTCTTCTTACTAGGCTTCTTGATATTAAACCTCAAACTAGGATTTCTATTCCTGAGATTATGGAGAATCGTTGGTTTAAGATAGGTTTTAAGCATATTAAATTTTATGTTGAGGATGATGTTGTTTGTGATCTTGATTCACTTGATCTTGATGGTGAGGATAATAATAATAAGGTAGTAAAGGTCGATGATCATCACGATGAAGTACTGGAATCAGTATCAGAAAATGAATCGGATTCTGAGGTTGTGAATAGAAGGATCAGGAATCGTGGTTCATTGCCAAGGCCTGCAAGTTTGAATGCTTTTGATATTATATCGTTTTCGCAAGGTTTTGATCTTTCTGGTTTATTTGAGGAAAAGGGTGATGAGGCAAGGTTTGTGTCTAGTGCATCAGTGCCAAAGATAATATCAAAATTGGAGGAAGTTGGTCAAATGGTTAGGTTCAATGTGAGGAAGAAAGATTGCAAGGTTAGCTTGGAGGGTTCAAGAGAAGGGGCAAAAGGGCGATTGACTATTGCTGCCGAGGTCTTCGAATTGACACCTTCTTTGGTGGTGGTTGAGGTGAAGAAAAAAGGAGGGGATAAGGTTGAGTATGATAAATTCTTAAACACTGAATTGAAGCCTGCTTTGCATAGTTTAACCAAGGAGGAATCTGCAGGTTCTTCAAGTCAAACTACACCAGATGAATCTTTGCAACAACGTGCATTTTCTGATTCTGCCATCGACAAACATTCAGATAGTATTGAATCTCTGAACTTAGATACCTGA 1533 0.377 MAVVAAPKKNNSMNKKDNPNLLLGRFELGKLLGHGTFAKVHLAKNLKTGESVAIKIISKDKILKSGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLICAVGFCHARGVFHRDLKPENLLLDEKGNLKVSDFGLSAVSDEIKQDGLFHTFCGTPAYVAPEVLSRKGYDGAKVDIWSCGVVLFVLMAGYLPFHDPNNVMAMYKKIYKGEFRCPRWFSPELVSLLTRLLDIKPQTRISIPEIMENRWFKIGFKHIKFYVEDDVVCDLDSLDLDGEDNNNKVVKVDDHHDEVLESVSENESDSEVVNRRIRNRGSLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSASVPKIISKLEEVGQMVRFNVRKKDCKVSLEGSREGAKGRLTIAAEVFELTPSLVVVEVKKKGGDKVEYDKFLNTELKPALHSLTKEESAGSSSQTTPDESLQQRAFSDSAIDKHSDSIESLNLDT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2929 510 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2929 510 MobiDBLite consensus disorder prediction 494 510 - -
Mtr8g2929 510 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 8 476 - -
Mtr8g2929 510 ProSiteProfiles NAF domain profile. 349 373 IPR018451 GO:0007165
Mtr8g2929 510 Gene3D Kinase associated domain 1, KA1 351 470 - -
Mtr8g2929 510 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Mtr8g2929 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Mtr8g2929 510 Pfam NAF domain 351 407 IPR004041 GO:0007165
Mtr8g2929 510 CDD CIPK_C 355 465 - -
Mtr8g2929 510 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2929 510 SUPERFAMILY Protein kinase-like (PK-like) 22 282 IPR011009 -
Mtr8g2929 510 CDD STKc_SnRK3 25 280 - -
Mtr8g2929 510 MobiDBLite consensus disorder prediction 467 510 - -
Mtr8g2929 510 MobiDBLite consensus disorder prediction 470 493 - -
Mtr8g2929 510 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2929 510 Gene3D Transferase(Phosphotransferase) domain 1 16 346 - -
Mtr8g2929 510 PANTHER - 8 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2929 Mtr-Chr8 39906550 39908432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2929 21 472 CBL-interacting serine-threonine protein kinases AT4G18700 74.505 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr8g2929 Pkinase 3.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2929 - - gmx:100807567 723.776