Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2928 ATGCTAATTATCAGTACTCCATTGTTATCTGCACATAAGTTTAAGGTCGGTGGGAAAGATGGTTGGACAGTGAAAGCCTCGGGACACTATGAAGTCTGGGCTAGTAGAATCAAGTTTCTAGTCAGCGACACACTTAATTTCAAGTATAACAAACTAGTCGATTCACTATTGATGGTAAACAAACAAGCCTATGATTCATGCAACGTTACGAACCCAATTCGTAAGATGCATGGTGGAGATTCAACATTTTTGTTGGACAAACCGGGACACTTTTACTTCATCAGTGGAAATGTTAAACATTGCGTAAAGGGTGAAAAGTTGAGCCTTGTGGTTTTGTCCCACCAAGAACATCATGGACCATCGTTATCTCCAGTACCAGCAAATGCTCCAACATCAGGTGTGCACGACGGGATTGCTCTGGTATCAAGTGGTCACCACATGGTTGCTCCAGCGCCACATCATGATCATTCGGGTTTTACGAGGTTGAGTGGTTCTTTTGTGGTCTGTGTTGTGCTGGCTTTAATTTTAGATAGCTTTGTTTTTTAG 546 0.4212 MLIISTPLLSAHKFKVGGKDGWTVKASGHYEVWASRIKFLVSDTLNFKYNKLVDSLLMVNKQAYDSCNVTNPIRKMHGGDSTFLLDKPGHFYFISGNVKHCVKGEKLSLVVLSHQEHHGPSLSPVPANAPTSGVHDGIALVSSGHHMVAPAPHHDHSGFTRLSGSFVVCVVLALILDSFVF* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2928 181 PANTHER EARLY NODULIN-LIKE PROTEIN 1 125 - -
Mtr8g2928 181 Pfam Plastocyanin-like domain 22 104 IPR003245 GO:0009055
Mtr8g2928 181 Gene3D - 10 117 IPR008972 -
Mtr8g2928 181 SUPERFAMILY Cupredoxins 11 112 IPR008972 -
Mtr8g2928 181 ProSiteProfiles Phytocyanin domain profile. 12 113 IPR003245 GO:0009055
Mtr8g2928 181 CDD OsENODL1_like 12 112 IPR041846 -
Mtr8g2928 181 PANTHER BLUE COPPER PROTEIN 1 125 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2928 Mtr-Chr8 39898558 39899550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2928 10 152 Phytocyanin Superfamily AT4G28365 43.333 1.14e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2928 - - mtr:MTR_8g086360 375.17