Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2915 ATGGCTTCTTCTGGTGGAACTTATTCATCTGGCACAAGCTCTCTTCAAAACTCTGGATCAGAGGGAGATCATAATCACGTGCAGGTGAACATAACAGATCAAAAGAAGAGGAAGAGAATGCAATCCAACAGAGAATCAGCACGAAGATCAAGGATGAAGAAACAACAACATATGGAAGATCTAAGCAACCAAATTGAACAGCTGAAAAAAGAGAATATTCAAATAAGCACAAACGTTGGAGTAACTACTCAGATGTATCTGAACGTGGAATCTGAAAATGCTATTCTTAGGGTTCAAATGGCTGAACTTAGCCACAGGTTGCAATCACTTAATGATATTATTCATTACATTGAATCAAGTAACTCACTCTTTCAGGAGACAGATCAATTGTTCAATGATTGTGGATTCTCGGACACATGGAACACTTTTCCTGTTAATCAACAACCAATCATGGCTTCTTCGGATCATATGTTAATGTATTGA 483 0.3768 MASSGGTYSSGTSSLQNSGSEGDHNHVQVNITDQKKRKRMQSNRESARRSRMKKQQHMEDLSNQIEQLKKENIQISTNVGVTTQMYLNVESENAILRVQMAELSHRLQSLNDIIHYIESSNSLFQETDQLFNDCGFSDTWNTFPVNQQPIMASSDHMLMY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2915 160 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Mtr8g2915 160 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Mtr8g2915 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 159 - -
Mtr8g2915 160 SUPERFAMILY Leucine zipper domain 35 87 IPR046347 GO:0003700|GO:0006355
Mtr8g2915 160 MobiDBLite consensus disorder prediction 28 64 - -
Mtr8g2915 160 Gene3D - 33 89 - -
Mtr8g2915 160 Pfam Basic region leucine zipper 32 76 IPR004827 GO:0003700|GO:0006355
Mtr8g2915 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 79 IPR004827 GO:0003700|GO:0006355
Mtr8g2915 160 MobiDBLite consensus disorder prediction 1 64 - -
Mtr8g2915 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Mtr8g2915 160 MobiDBLite consensus disorder prediction 1 27 - -
Mtr8g2915 160 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 159 - -
Mtr8g2915 160 Coils Coil 44 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2915 Mtr-Chr8 39774344 39775763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2915 31 160 bZIP Transcription Factor Family AT4G34590 52.174 2.41e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr8g2915 bZIP_2 1.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2915 K25786 - gmx:778139 181.415